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AP Bio Midterm Vocab Flashcards

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283175398ecologystudy of distribution and abundance of organisms & interaction with environment
283175399divisions of ecologyorganismal, population, community, ecosystem
283175400populationa group of interbreeding organisms
283175401communitya group that cannot interbreed, different species interacting
283175402ecosystemliving and nonliving things interacting
283175403biotic factorssomething living (e.g. animals, plants)
283175404abiotic factorssomething not living (e.g. rocks, sunlight, weather)
283175405aquatic biomesorganisms dependent on light and temperature (usually stable); provides most of earth's food & oxygen; salt or fresh water/light/depth all impact organisms
283175406terrestrial biomesorganisms dependent on rainfall and temperature
283175407tropical forestsnear equator (77-84ºF) tropical rain forest: constant rain tropical dry forest: seasonal rain plants: intense competition for light (canopy); plenty of water; diverse organisms
283175408savannaequatorial and subequatorial: temps 77-84ºF rainy seasons & dry seasons; occasional fires and droughts; grassland with scattered trees; large herbivores (zebra, bison); and carnivores (lions)
283175409desert30º N & S latitude from equator; sparse rainfall; temps -22-122ºF (vary daily) plants: low & scattered; cacti, small shrubs animals: snakes, lizards, beetles, etc. (exothermic animals)
283175410chaparralmid-latitude, coastal regions; temps 50-104ºF; seasonal rains, fires; not a lot of rainfall; lots of shrubs and small trees; deer, goats, reptiles, birds, etc.
283175411temperate grasslandcold, dry winters; hot, wet summers; tall grasses; large mammals/herbivores; lots of farming
283175412temperate deciduous(broadleaf) forestmid-latitude in north; cold winters; hot summers; moderate rain/snow; deciduous trees (drop leaves); mammals hibernate
283175413coniferous forest/taiganorthern NA and Eurasia; harsh winters - heavy snowfall; periodic droughts; cone-bearing trees; moose, brown bears, etc.
283175414tundralong, cold winters; short, cool summers; permafrost (prevent tree growth) - ground is frozen; very little precipitation (like a desert); mosses, grasses, small trees, etc.; oxen, foxes, bears, etc.
283175415oligotrophic lakesdeep, nutrient poor, clear (little photosynthesis); O2 rich waters supporting fish; very few plants
283175416eutrophic lakesshallow; high nutrient content; murky (LOTS of photosynthesis); potentially low O2, may not support fish; lots of plant growth
283175417wetlandhas water at least some of the time; support wide variety of life
283175418estuarytransition area between river and sea; very productive biologically; supports wide variety of life
283175419intertidal zonesexposed to tide fluctuations; adaptations to waves, tides, and fluctuating temperatures
283175420pelagic zoneopen water of any depth
283175421coral reefformed by calcium carbonate exoskeletons of corals
283175422benthic zoneneritic and abyssal zones
283175423neritic zoneseafloor below coastal waters
283175424abyssal zonedeep ocean floor; hydrothermal vents; extremeophiles
283175425ethologystudy of animal behavior
283175426proximate questionwhat caused, produced or has modified the behavior?
283175427ultimate questionhow is the behavior beneficial?
283175428evolution of behaviorselection of behaviors that increase survival and reproduction
283175429innateinstinctive or inherited behaviors
283175430kinesischange in activity due to stimulus
283175431taxisdirected movement to or from stimulus
283175432phototaxismovement toward light
283175433rheotaxismovement against the current
283175434fixed action patterns (FAP)innate behaviors triggered by sign stimuli; follow a regular, unvarying pattern
283175435migrationlong distance, seasonal movement of animals
283175436imprintinguses learned and innate behavior; during sensitive period offspring imprints on parent and learns behavior
283175437associative learninglinking one environmental feature with another
283175438classical conditioningstimulus associated with particular outcome (Pavlov's dogs)
283175439operant conditioningtrial and error, reward and punishment (Skinner box, water maze)
283175440habituationignore persistent stimuli
283175441spatial learningmemory of environment's spatial structure
283175442observational learningcopying a behavior
283175443insightnew situation emits behavior that generates desirable outcome
283175444releaser pheromonescause immediate/specific behavior change
283175445primer pheromonescause physiological changes
283175446dispersiondistribution of individuals in a population
283175447demographicsstatistical analysis of populations and how they change over time
283175448survivorship curvetype 1 curve: most reach middle age (ex. human); type 2 curve: random survival (ex. rodents); type 3 curve: most die young (ex. oysters)
283175449biotic potentialmaximum growth rate of a population under ideal conditions (unlimited resources and growth)
283175450exponential growthunlimited growth of individual
283175451carrying capacitygrowth of individuals limited to what environment can sustain
283175452limiting factorsprevent population from reaching biotic potential; affect the carrying capacity (K)
283175453density dependent factorslimiting factors become more intense as population density increases
283175454density independent factorslimiting factors are independent of population density
283175455logistic growthlimiting factor restricts size of population to carrying capacity
283175456r-selected speciesopportunistic; rapid growth (J-shaped curve); quickly reproduce, then die; many offspring; little or no parenting; first to colonize
283175457k-selected speciesrelatively constant population (at carrying capacity); reproduce many times, live long; few offspring; intensive parenting; replace r-selected species
283175458interspecific competitioncompetition between different species (-/-)
283175459predationorganism totally or partly consume another organism (+/-)
283175461symbiosistwo species in contact during some or all of their lives(+/0, +/+, +/-)
283175463nichesum of all biotic and abiotic resources used by a species
283175465competitive exclusion principle (Gause's principle)no two species can occupy the same niche; one species outcompetes and eliminates another
283175467resource partitioningdivide resources among competing species; slightly different resources or get resources another way
283175469fundamental nicheniche potentially occupied by species
283175471realized nicheniche that it actually occupies
283175473character displacement (niche shift)some characteristics help obtain better resources; reduces competition and leads to divergence of features
283175474coevolutionevolution in one species in response to a new adaptation of another
283175476aposematic colorationcoloration warns prey
283175478mimicryspecies resemble one another
283175480mullerian mimicryanimals with special defenses share coloration
283175482batesian mimicryanimals without defense mimics animals with special defenses
283175484mutalismboth species benefit
283175486commensalismone species benefits, second species isn't helped nor harmed
283175488parasitismparasites benefit, host is harmed
283175490dominant specieslarge biomass; big influence on other species
283175492invasive speciesno predators/pathogens; rapid growth/large biomass
283175494keystone specieslarge impact due to ecological role
283175496successionchange in composition of terrestrial species over time
283175498primary successionoccurs where life never existed
283175500secondary successionoccurs on habitat destroyed by fire, flood, etc.; soil and seed bank already present
283175502energy flowenergy can be neither created nor destroyed, only transferred and transformed
283175504chemical cyclingmatter cannot be created nor destroyed
283175506herbivoreeats mainly autotrophs
283175508carnivoreeats mainly animals
283175510omnivoreeat animals and autotrophs
283175512net primary productiongross primary production - energy lost to respiration
283175515trophic efficiencypercent energy transferred from one trophic level to the next; typically about 10%
283175517biogeochemical cyclesflow of essential elements between biotic and abiotic factors
283175519reservoirsmajor storage locations for essential elements
283175521assimilationprocess of incorporating elements into terrestrial
283175523moleculetwo or more atoms bonded together
283175525compoundtwo or more different atoms bonded together
283175528elementpure substance that can't be changed into a simpler substance
283175530atomsmallest unit of an element
283175532sub-atomic particlesprotons, neutrons and electrons
283175534isotopessame element, different # of neutrons, so atomic mass is different
283175537atomic mass# of protons + # of neutrons
283175539atomic number# of protons
283175541electro-negativitythe ability of an atom to attract electrons
283175543ionic bondinvolves gain and loss of electrons; occurs when there's a big difference in electro-negativity of atoms
283175546covalent bondinvolves the sharing of electrons
283175548non-polar covalent bondsatoms have similar electro-negativities; share electrons equally
283175550polar covalent bondsatoms have different electro-negativities; share electrons unequally; electrons concentrate near more electronegative atom = negative pole; less electrons around less electronegative atom = positive pole
283175552hydrogen bondshydrogen in one molecule has a positive charge and is attracted to the negative charge of an atom in another molecule; this is not a covalent bond - it's much weaker; very important biologically - easy to make and break
283175555cohesionattraction between like substances; under tension, stretch but do not break; helps pull water up plants (xylem); creates high surface tension (forms smooth, round surface)
283175557adhesionattraction of unlike substances; water adheres and rises up objects
283175559buffersminimize changes in H+ and OH- in a solution; accept or donate H+ to maintain pH
283175562organic moleculecontains carbon and hydrogen
283175564hydrocarbonslong chains of hydrogen and carbon
283175566functional groupsgroups of atoms that predict molecular properties
283175568macromoleculesorganic molecules consisting of hundreds or thousands of atoms
283175570polymersmacromolecules of a single unit (monomer) repeated many times
283175573primary structureunique sequence of amino acids
283175575secondary structuredue to hydrogen bonding; alpha-helix or beta-pleated sheet
283175577prionsproteins that affect folding of other proteins
283175579tertiary structureirregular contortions; hydrogen bonds and/or ionic bonds form between R groups; hydrophobic R groups clump away from water
283175582disulfide bridgesulfur in cys bonds to sulfur in another cys; stabilizes turns in peptide
283175584quaternary structureprotein assembled from 2 or more separate peptide chains
283175586chaperoninsenzymes and special proteins the "chaperone" the protein folding
283175589metabolismchemical reactions that occur in biological systems
283175591catabolismbreaks apart substance
283175593anabolismbuilds up substance
283175596first law of thermodynamicsenergy is neither created nor destroyed, it only changes form
283175598second law of thermodynamicsdisorder in the universe always decreases; for any process, energy available for work decreases - entropy; typically energy is lost as heat
283175599free energy (G)energy available for work
283175600exergonic reactionsrelease energy; free energy decreases, so ∆G is negative; reaction will occur spontaneously
283175601endergonic reactionsconsume energy; free energy increases, so ∆G is positive; reaction will require energy input
283175602activation energyminimum energy needed for reaction to occur
283175603catalystaccelerates rate of reaction by lowering activation energy; remains chemically unaltered; enzyme is a biological catalyst
283175604equilibrium∆G = 0; rate of reaction in forward reaction = rate of reaction in reverse direction; no net production of reactant or product
283175605enzymesproteins that lower activation energy
283175606substratewhat the enzyme acts upon
283175607cofactorsnon-protein molecules that help enzymes fit substrates
283175608allosteric enzymestwo binding sites; active site for substrate
283175609allosteric activatorbinds to allosteric site, stabilizes active form of enzyme
283175610allosteric inhibitorbinds to allosteric site, stabilizes inactive form of enzyme
283175611coopertivitysubstrate primes enzyme to accept more substrate molecules; occurs when enzyme has two or more subunits
283175612competitive inhibitionsubstance mimics substrate and blocks enzyme's binding site
283175613non-competitve inhibitionsubstance binds to enzyme at locations other than active site; disables enzyme
283175614cellbasic functional unit of all living things
283175615cell fractionationhomogenize, then centrifuge cells
283175616lipid bilayertwo sheets of phospholipids arranged tail to tail; selectively permeable
283175617outer facepolar hydrophilic head
283175618inner facenonpolar hydrophobic tails
283175619peripheral proteinsloosely bound to membrane surface
283175620integral proteinsextend into the membrane; must be amphipathic
283175621transmembrane proteinsintegral protein that spans the entire membrane
283175622integrinstransmembrane protein binds to extracellular and intercellular areas; transmit signals intra and extracellularly; also provide strength
283175623cholesterol molecules"temperature buffers"; prevents lipid bilayer from freezing or melting
283175624glycolipids/glycoproteinsattachment to membrane; work as markers for cell-to-cell recognition
283175625passive transportno energy (ATP) needed to move things around a cell; utilizes concentration gradient; substances diffuse from high to low; selectively permeable membrane
283175626dialysisdiffusion of solutes across a selectively permeable membrane
283175627simple diffusionmovement from high solute to low solute to equilibrium
283175628hypertonic solutionhigher concentration of solutes
283175629hypotonic solutionlower concentration of solutes
283175630isotonic solutionequal concentration of solutes
283175631osmotic pressurepressure created by water as it enters region by osmosis
283175632turgor pressurelarge osmotic pressure caused by water entering cells within cell wall
283175633plasmolysiscells collapse caused by water leaving the cell (especially in plant cells with central vacuoles)
283175634facilitated diffusiondiffusion of solutes through channel or carrier proteins in plasma membrane; no need for energy
283175635vesicular transportvesicles move macromolecules of large particles across plasma membrane
283175636exocytosisvesicles fuse with plasma membrane and release contents outside of cell; used when cell produces substances for export
283175637endocytosiscapture substance outside of cell; plasma membrane merges to engulf it; substance enters cytoplasm enclosed in a vesicle
283175638phagocytosis"cellular eating" of un-dissolved material
283175639pinocytosis"cellular drinking" of dissolved substances; plasma membrane folds inward and forms vesicle
283175640receptor mediated endocytosisextracellular molecules bind to specific receptors; occurs in coated pits region of plasma membrane; pits, receptors, and specific molecules (ligands) fold inward; vesicle formed
283175641active transportneeds energy (ATP); usually against concentration gradient (low to high); integral proteins transport solutes (Na+, K+, Cl-, H+), amino acids and monosaccharide's across membrane
283175642cytoplasmpart of the cell outside the nucleus but inside the membrane
283175643cytosolpart of the cytoplasm, not in membrane-enclosed organelle; fluid matrix of H2O and dissolved substances (proteins, nutrients, ect.)
283175644cytoskeletonprotein fiber network: shapes cell, stabilizes organelles and helps cell move
283175645organellesphysically separated to isolate metabolic reactions
283175646nucleusbound by nuclear envelope (phospholipid bilayer); site of chromosome separated during cell division; contains nucleoli
283175647chromatinthreadlike DNA
283175648chromosomecondensed DNA forms at cell division
283175649histonescoil DNA into nucleosomes - very organized
283175650ribosomesmade in the nucleolus from RNA and proteins; subunits - 60S & 40S move across nuclear envelope into cytoplasm (combine as 80S in cytoplasm)
283175651free ribosomesfound in cytosol; make proteins for use in cytosol
283175652bound ribosomeson rough ER; make proteins for membranes, organelles, or export
283175653rough endoplasmic reticulumhas ribosomes; makes secretory proteins and membranes components
283175654smooth endoplasmic reticulumno ribosomes; makes lipids (including steroid hormones); in liver, breakdowns toxins from cell reactions and drugs
283175655golgi bodiesflattened sacs arranged like bowls; make polysaccharides; modify and package proteins, lipids & polysaccharides into vesicles
283175656lysosomemembranous sac of hydrolytic enzymes; break down food, cellular debris & foreign invaders; recycle organelles; numerous in single cell eukaryotes and white blood cells; membrane prevents cell from digesting itself
283175657peroxisomesenzymatically transfers H from toxins to oxygen forming H2O2; enzymatically converts H2O2 (toxic)→ H2O; found in liver & kidney (both break down toxins); split in two when get too large
283175658microtubulestubulin (protein) polymers; in spindle apparatus (guides chromosomes during cell division); in flagella and cilia (locomotion)
283175659intermediate filamentssupport cell shape
283175660microfilamentsactin (protein); cell motility; for phagocytes, cleavage furrows, and muscle cell contraction
283175661mitochondriacarry out cellular (aerobic) respiration; two membranes; folded inner membrane (cristae); contains own DNA and ribosomes & can self-replicate
283175662endosymbiotic theorylarge eukaryote or prokaryote engulfed small prokaryotes; small prokaryotes became mitochondria and/or chloroplasts
283175663flagellalong and few microtubules in 9 + 2 array
283175664ciliashort and many microtubules in 9 + 2 array
283175665thylakoidinterconnected internal sacs stacked into grana
283175666stromafluid outside thylakoid but inside inner membrane
283175667chloroplastcarries out photosynthesis; has its own DNA and ribosomes and can self replicate
283175668centrosomejust outside the nuclear envelope; microtubules of spindle apparatus form here during cell division; centrioles located here may play a role in organizing microtubules
283175669basal bodiesat base of each flagellum and cilium; appear to organize development of flagellum and cilium
283175670cell wallfound in plants, fungi, protists and bacteria; develop in plasma membrane; supports cell
283175671food vacuolesreceptacles of nutrients
283175672central vacuoleslarge bodies in plant cells; decreases the volume of cytoplasm; increases surface to cytosol ration; when filled, exert turgor pressure on cell walls; mainly cell rigidity; stores nutrients, pigments, inorganic ions; carry out similar functions of lysosomes in animal cells
283175673contractile vacuolesin single celled organisms; pump water in and out to maintain water balance
283175674plasmodesmatacell connection in plants; channels that perforate cell walls; cytosol contents pass from one cell to next; creates one living continuum in plant
283175675desmosomescell connection in animals; protein (keratin) attachment between adjacent animal cells; function like rivets, holds tissues that are stressed together
283175676tight junctionstightly stitch adjacent cells together; prevent fluid from leaking between cells
283175677gap junctionsnarrow tunnels between cells; allow communication between cells through material exchange or electrical impulses
283175678photosynthesispurpose: converting light energy to chemical bond energy; light + 6H2O + 6 CO2 -> C6H12O6 + 6 O2
283175679chloroplastabsorbs sunlight for photosynthesis; found in mesophyll cells in interior of leaf; contain chlorophyll
283175680chlorophyllpigment molecules; absorbs every light wavelength except the color you can see; made of chlorophyll a, chlorphyll b, and carotenoids
283175681thylakoidscontain light-absorbing pigments and enzymes for light-dependant rxn; stack forms a granum
283175682stomatamicroscopic pores in leaf where CO2 and O2 are exchanged
283175683photophosphorylationusing photons to phosphorylate ADP into ATP via proton gradient
283175684photorespirationoccurs when O2 is too high and CO2 is too low
283175685respirationextracting energy from glucose to form ATP; C6H12O6 + 6O2 -> 6CO2 + 6H2O + energy
283175686oxidative phosphorylationusing oxygen to phosphoralate ADP into ATP
283175687cristaeinner foldings of inner mitochondrial membrane; increase surface area; separate matrix from intermembrane space of mitochondria
283175688genomegenetic material in nucleus
283175689interphaseDNA replicates; cell growth after mitotic phase - accounts for 90% of cell cycle; chromatin enclosed in nuclear envelope; within nucleus, one or more nucleoli visible; outside nucleus, centrosomes replicate
283175690nuclear divisiondivides genetic material in nucleus
283175691mitosisdivides nucleus so both daughter cells are genetically identical
283175692meiosisreduction division; produces daughter cells with ½ genetic information of the parent cell
283175693cytokinesisdivides cytoplasm; forms two separate plasma membranes
283175694density dependent inhibitioncrowded cells stop dividing; some cells may lose contact inhibition and divide uncontrollably (cancer)
283175695cell senescencelimits the number of times a cell divides
283175696asexual reproductionuses mitosis to produce clone
283175697sexual reproductionproduces genetically distinct offspring
283175698diploid cell (2n)two copies of every chromosome - homologous chromosomes; one homologue from maternal parent, one from parental; 46 chromosomes; 23 homologous pairs
283175699synapsispairing of homologous chromosomes
283175700tetradgroup of four chromatids
283175701chiasmatacriss crossed chromatids of homologous chromosomes
283175702crossing overexchange of genetic material at the chiasmata
283175703synaptonemal complexprotein structure that binds homologs together
283175704fertilizationfusion of egg and sperm
283175705zygotediploid cell, result of fertilization
283175706dominant alleletrait coded is trait expressed
283175707recessive alleletrait coded not always expressed
283175708homozygous recessivetwo recessive alleles inherited (pp); recessive trait expressed
283175709heterozygoustwo inherited alleles are different (Pp); only dominant allele is expressed
283175710true breedingplants produce offspring of same variety when self-pollinate; can never be heterozygous
283175711law of segregationalleles segregate during meiosis
283175712law of independent assortmenthomologous chromosomes segregate independently; produces mix of maternal and paternal chromosomes in gametes
283175713monohybridheterozygous for only one trait
283175714incomplete dominancecombined expression of two different alleles in heterozygous condition; produce a blending of individual expressions
283175715co-dominanceboth inherited alleles are completely expressed
283175716multiple allelesgenes that exist in populations in more than two allelic forms
283175717epistasisone gene affects phenotypic expression of second gene
283175718pleiotrophysingle gene has more than one phenotypic expression
283175719polygenic inheritanceinteraction of many genes shapes a single phenotype
283175720linked genesgenes close together on same chromosome; cannot segregate independently
283175721autosomeschromosomes not directly involved in determining sex
283175722sex chromosomesresponsible for determining sex
283175723nondisjunctionchromosomes don't separate properly during meiosis; both homologous chromosomes migrate to the same pole; missing a chromosome
283175724deletionschromosomal segment deleted
283175725duplicationchromosome segment duplicated
283175726translocationsegment moved from one chromosome to another
283175727inversionsegment reverses itself within a chromosome
283175728nucleosomechromatin (DNA) coiled around 8 or 9 histone proteins
283175729euchromatinnucleosomes loosely together; DNA is being actively transcribed
283175730heterochromatinnucleosomes tightly compacted; DNA is inactive
283175731origins of replicationwhere two DNA strands separate; form replication bubbles; special nucleotide sequences
283175732helicaseenzyme that unwinds the DNA helix
283175733replication forkthe y-shaped region where new DNA strands elongate
283175734topoisomerasegroup of enzymes that break and rejoin the double helix; allows twists to unravel; prevents knotting
283175735single stranded DNA binding proteinsstabilize DNA that is unwound and keep them apart
283175736telomeraseenzyme catalyzes lengthening of telomeres in germ (stem) cells
283175737codonthree adjacent nucleotides on mRNA that codes on an amino acid
283175738transcription factorscollection of proteins that recognize the promotor region (TATA box)
283175739exonssequences that express polypeptide code
283175740intronsnon-coding sequences, will be removed
283175741anticodontriplet of nucleotides; pairs with mRNA codon to attach amino acid

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