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AP Biology Biochemistry Review Flashcards

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9876617548Carbohydrate Examplesglucose, fructose, sucrose, starch, glycogen, cellulose, monosaccharides, disaccharides, polysaccharides0
9876617741Disaccharide1
9876617742Monosaccharide2
9876617743Polysaccharide3
9876617744Glycosidic Linkage4
9876617745Starch5
9876617746Cellulose6
9876617549Lipid Examplesfatty acids, fats, saturated fats, unsaturated fats, steroids, phospholipids, cholesterol, triglycerides7
9876617747Ester Linkage8
9876617748Unsaturated Fat9
9876617749Saturated Fat10
9876617750Steroid11
9876617751Phospholipid12
9876617752Nucleotide13
9876617550Nucleic Acid ExamplesDNA, RNA, (ATP and ADP are modified nucleic acids)14
9876617753DNA15
9876617754RNA16
9876617551Protein Examplesamino acids, primary, secondary, tertiary, quaternary structures, collagen, hemoglobin, enzymes17
9876617755Triglyceride18
9876617552Amino Acid Examplesglutamine, proline, cysteine, lycine, ...19
9876617756Amino Acid20
9876617757Primary Structure of a Protein21
9876617758Secondary Structure of a Protein22
9876617759alpha helix (secondary)23
9876617760beta-pleated sheet (secondary)24
9876617761Tertiary Structure of a Protein25
9876617762Quaternary Structure of a Protein26
9876617763Disulfide Bridge27
9876617764Hydrogen Bonds28
9876617765Hydrophobic Interaction29
9876617766Ionic Interaction (salt bridge)30
9876617553*nucleic acid*kind of macromolecule that stores, transfers, and expresses genetic information31
9876617554Carbon, Hydrogen, Oxygen, Phosphorus, Nitrogen (CHOPN)elements that make up a nucleic acid32
9876617555*the hydrogen bonds between the purines and pyrimidines*why is DNA more stable than RNA?33
9876617556*nucleotide*the monomer of a nucleic acid34
9876617557*a phosphate group, a five-carbon sugar, and a nitrogen base*structure of a nucleotide35
9876617558*dehydration synthesis between nucleotides*a kind of condensation reaction in which water is removed in order to join together nucleotides36
9876617559phosphodiester bondlinkage that results from dehydration synthesis of the phosphate group of the first nucleotide to 3' carbon of the five-carbon sugar of the next nucleotide37
9876617560*purines*double-ringed nitrogen base such as adenine or guanine38
9876617561how to remember that adenine and guanine are purinespure silver - pure for purines; Ag is the chemical symbol for silver - A for adenine and g for guanine39
9876617562*pyrimidine*single-ringed nitrogen base such as cytosine, uracil, or thymine40
9876617563how to remember Cytosine, Uracil, and Thymine are PYrimidinesCUT the Py41
9876617564*DNA*deoxyribonucleic acid; a polymer of nucleotides that stores and transmits genetic information in the order of its nitrogen bases42
9876617565double helixterm used to describe the arrangement of a DNA strand43
9876617566*RNA*ribonucleic acid; a polymer of nucleotides that transfers genetic information44
9876617567*how RNA differs from DNA*the sugar in RNA is ribose; Uracil bonds with Adenine; RNA is single-stranded45
9876617568*how DNA differs from RNA*the sugar in DNA is deoxyribose; Thymine bonds with Adenine; DNA is double-stranded46
9876617569mRNA, tRNA, rRNAthe three kinds of RNA47
9876617570anti-parallelterm meaning that the two strands of a DNA molecule run in opposite direction of each other; one is upside-down to the other48
9876617571*hydrogen bond in nucleic acids*a weak bond that holds the nitrogen bases to each other49
9876617572*thymine*in DNA, adenine only bonds with___________and is held together with two hydrogen bonds50
9876617573*cytosine*guanine only bonds with____________and is held together with three hydrogen bonds51
9876617574*uracil*in RNA, adenine only bonds with__________52
9876617575James Watson and Francis Crickscientists who discovered the structure DNA53
9876617576DNA replicationprocess used to make a copy of a DNA strand54
9876617577transcriptionthe copying of the DNA sequence onto RNA55
9876617578translationthe creation of a polypeptide from the information transcribed from DNA56
9876617579genomethe complete set of DNA in a living organism57
9876617580*proteins*a macromolecule made chains of amino acids58
9876617581*Carbon, Hydrogen, Oxygen, Nitrogen (CHON)*elements that make up a protein59
9876617582categories of proteinsstructural proteins, storage proteins, transport proteins, defensive proteins, and enzymes60
9876617583*enzymes*proteins that speed up chemical reactions (reduce the activation energy required)61
9876617584*amino acid*building block (monomer) of proteins, composed of an amino group and a carboxyl group, a hydrogen atom, and an R-group62
9876617585*a carboxyl group, an amino group, a central Carbon, a Hydrogen, and an R-group*structure of an amino acid63
9876617586*20*the number of different amino acids that occur extensively in all living organisms64
9876617587disulfide bridgecovalent bond formed between two cysteine amino acids when their SH groups become oxidized; this helps determine how a protein folds65
9876617588*dehydration synthesis between amino acids*process that bond an amino acid to another amino acids (forms peptide bond)66
9876617589*peptide bond*covalent bond formed between amino acids67
9876617590*from amino group to carboxyl group (N-C-C+N-C-C)*order that the amino acids join together68
9876617591*polypeptide chain*a long line of amino acids bonded together by peptide bonds69
9876617592*R-group*stands for the rest of the compound, different for each kind of amino acid, giving the amino acid its properties70
9876617593*properties the R-group may give the amino acid*hydrophilic or hydrophobic, polar or nonpolar, acidic or basic71
9876617594side chainanother name for the R-group72
9876617595four levels of a proteins structureprimary structure, secondary structure, tertiary structure, quaternary structure73
9876617596*primary structure*the order of amino acids in a peptide chain that makes up a protein74
9876617597*secondary structure*three-dimensional shape that occurs from the hydrogen bonding between the amino and carboxyl groups (the backbone) of nearby amino acids; may be shaped as an alpha helix or a beta pleated sheet75
9876617598fibrous proteinsproteins whose shapes are dominated by the secondary structure of a beta pleated sheet or alpha helix, like collagen76
9876617599*tertiary structure*additional three dimensional shaping to a secondary structure due to interactions of the R-groups77
9876617600*quaternary structure*a protein that is assembled from two or more peptide chains; hemoglobin consists of four peptide chains that are held together by hydrogen bonding and interactions among R-groups78
9876617601globular proteinsproteins whose shape is dominated by the additional three-dimensional shaping of a tertiary structure, like hemoblobin79
9876617602*denatured*a change in the shape of a protein due to chemical treatments, temperature, change of pH, or high concentrations of polar or nonpolar substances; may or may not be irreversible80
9876617603*hydrogen bonds in proteins*bond that occurs between R-groups that stabilize folds in proteins81
9876617604*hydrophobic R-groups*move together to the interior of a protein, away from water82
9876617605van der Waals interactionsbond-like interaction that stabilize nearby hydrophobic R-groups83
9876617606ionic interactionsbond that forms between oppositely charged (positive and negative) R-groups84
9876617607salt bridgeanother name for ionic interactions that occur between oppositely charged (positive and negative) R-groups85
9876617608*lipids*macromolecule made of carbon, hydrogen and oxygen (CHO) that is mostly nonpolar not soluble in water;86
9876617609Carbon, Hydrogen, Oxygen (CHO)*elements that makeup both Carbohydrates and Lipids87
9876617610fats, oils, steroids, phospholipidsthe most important lipids88
9876617611Angelina Jolie's LIPS are filled with FAThow to remember FATs are a kind of LIPID89
9876617612*fatty acid*monomer of a lipid made of a hydrocarbon chain and a carboxyl group90
9876617613*amphipathic*having both hydrophobic and hydrophilc parts91
9876617614lots of energyhow much energy a hydrocarbon chain stores92
9876617615*dehydration synthesis in lipids*the removal of a water molecule to join fatty acids to other molecules (like glycerol)93
9876617616*triglyceride*lipid made of three fatty acids attached to a glycerol94
9876617617glycerola carbon alcohol that is hydrophilic95
9876617618*functions of lipids*long-term energy storage, insulation, part of the cell membrane, chemical messenger, waterproofing96
9876617619*saturated fatty acid*fatty acid that consists of all single-covalent bonds between each pair of carbon atoms; each carbon has two hydrogens bonded to it (saturated with hydrogens);97
9876617620food made of saturated fatty acidanimal fats and butter; bad fats98
9876617621unsaturated fatty acidsfatty acid that has one or more double covalent bonds between each pair of carbon atoms;99
9876617622food made of unsaturated fatty acidsplant & fish fats, vegetable oils; good fats100
9876617623*monounsaturated fatty acid*kind of unsaturated fat that consists only has one double covalent bond (the rest are single) between each pair of carbon atoms101
9876617624*polyunsaturated fatty acid*kind of unsaturated fat that has two or more double covalent bonds between each pair of carbon atoms102
9876617625*phospholipid*amphipathic lipid made of two hydrocarbon chains, glycerol, and a phosphate group103
9876617626hydrophobic tailanother name for the hydrocarbon chain in a phospholipid104
9876617627hydrophobic headanother name for the phosphate group in a phospholipid105
9876617628*the reason a phospholipid is amphipathic*the hydrocarbon chains (tails) are nonpolar, while the glycerol and phosphate group (head) is polar106
9876617629*phospholipid bilayer*the main structure of the cell membrane, made of phospholipids that are arranged with the fatty acid tails packed together and the glycerol and phosphate heads facing water in an aqueous solution107
9876617630van der walls interactionsweak interaction between nonpolar molecules; holds the hydrophobic fatty acid tails of a phospholipid together108
9876617631reason the phospholipid bilayer is stablevan der waals interactions hold the fatty acid tails together while hydrogen bonding binds the hydrophilic heads with water; also cholesterol is between the fatty acid tails stabilizing them109
9876617632*steroid*lipid made of four linked carbon rings attached to different functional groups (look like chicken wire fencing)110
9876617633examples of steroidscholesterol, sex hormones111
9876617634sex hormonestestosterone, progesterone, estrogen112
9876617635cholesterolthe most common steroid; is a component of the cell membrane as well as the precursor to all other steroids113
9876617636cholesterol vs. testosteronethe tail of cholesterol is replaced with a hydroxyl group114
9876617637many biologically important molecules are NOT soluble in a lipid, so cell membranes can be selectively permeablewhy are lipids good barriers in living organisms?115
9876617638how to number carbons in a ringclockwise from the right116
9876617639carbohydratemacromolecule made of Carbon, Hydrogen, and Oxygen that is soluble in water due to the hydroxyl groups117
9876617640*monosaccharide*the simplest kind of carbohydrate118
9876617641*simple sugar*another name for a monosaccharide119
9876617642-osesuffix carbohydrates usually end in (gluc-ose, fruct-ose)120
9876617643*examples of monossaccharides*glucose, fructose, galactose121
9876617644formula for sugar molecules(CH₂O)n where n is any number from 3 to 8122
9876617645*1:2:1*the ration of Carbon to Hydrogen to Oxygen in a carbohydrate123
9876617646alpha glucose vs. beta glucose structurethe reversal of the H and OH on the first carbon124
9876617647alpha glucose vs. beta glucose functionalpha glucose molecules can easily be broken down while beta glucose molecules can only be broken down by by certain bacteria125
9876617648α-glucoseanother name for alpha glucose126
9876617649β-glucoseanother name for beta glucose127
9876617650where the carbons are in a ring structurewhere four bond lines meet128
9876617651triosemonosaccharide made of three carbon atoms129
9876617652tetrosemonosaccharide made of four carbon atoms130
9876617653pentosemonosaccharide made of five carbon atoms; example is ribose in RNA and deoxribose in DNA131
9876617654hexosemonosaccharide made of six carbon atoms examples are glucose, fructose, mannose, galactose132
9876617655*disaccharide*two monosaccharides joined together by a glycosidic linkage133
9876617656*dehydration synthesis between monosaccharides*process used to combine monosaccarides into disaccharides and polysaccharides134
9876617657*glycosidic linkage*covalent bond that forms between a monosaccharide and another molecule (like another monosaccharide)135
9876617658*the reason why the formula of a disaccharide of glucose is C₁₂H₂₂O₁₁ and not C₁₂H₂₄O₁₂*one water molecule is lost when the condensation reaction joins together the two monosaccharides136
9876617659*sucrose*table sugar; disaccharide formed when glucose bonds with fructose137
9876617660lactosemilk sugar; disaccharide formed when glucose bonds with galactose138
9876617661*polysaccharide*three or more monosaccharides139
9876617662starcha polymer of α-glucose molecules that store energy in a plant cell140
9876617663glycogena polymer of α-glucose molecules that stores energy in animal cells; stored in the liver and muscles141
9876617664the reason why starch and glycogen have a large amount of branchingplants and animals can quickly add to their energy supply when energy is plentiful, or break it down the storage molecules when energy is in short supply142
9876617665cellulosea very stable polymer of β-glucose molecules that serves as a structural molecule in the walls of plant cells; major component of wood; the most abundant biological molecule on earth143
9876617666chitina polymer of β-glucose molecules that contains serves as the exoskeleton of arthopods such as insects, spiders, and shellfish; it has a nitrogen-containing group attached to the ring144
9876617667organic moleculesmolecules that contain carbon145
9876617668macromoleculeslarge organic molecules146
9876617669Clean Later Party Nowfour kinds of macromolecules - Carbohydrates, Lipids, Proteins, Nucleic acids147
9876617670organic chemistrythe study of carbon compounds148
9876617671the reason carbon is important to lifecarbon can form four strong covalent bonds with different elements; carbon is the main component of organic molecules; all organic molecules contain carbon (carbohydrates, lipids, proteins, nucleic acids)149
9876617672fournumber of covalent bonds carbon can form with other elements150
9876617673hydrocarbonscarbon and hydrogen atoms that are covalently bonded that make them stable and nonpolar151
9876617674nonpolarnot soluable in water152
9876617675polarsoluable in water153
9876617676isomerMolecules with same molecular formula but different structures (shapes)154
9876617677polymermolecules that consist of many repeated monomers155
9876617678monomermolecules that consist of a single unit156
9876617679condensation reactionthe process of removing a small molecule to join together monomers to make a polymer157
9876617680dehydration synthesisa kind of condensation reaction158
9876617681hydrolysisthe process of adding a water molecule to break a polymer into monomers159
9876617682functional groupsparts of organic molecules that are involved in chemical reactions160
9876617683polar covalent bondthe kind of bond between the oxygen atom and hydrogen atoms in a water molecule that results in the unequal sharing of electrons161
9876617684charge of the oxygen atom in a water moleculeslightly negative162
9876617685charge of the hydrogen atoms in a water moleculeslightly positive163
9876617686hydrogen bond in waterweak bond formed between water molecules164
9876617687universal solventProperty of water in which substances that are ionic or substances that have polar covalent bonds all dissolve in water.165
9876617688hydrophillicTerm for substances that dissolve in water.166
9876617689hydrophobicTerm for substances that do not dissolve in water.167
9876617690soluteA substance that dissolves into a solvent.168
9876617691solventA substance that dissolves another substance.169
9876617692aqueous solutionA solution in which water is the solvent.170
9876617693specific heatthe degree that a substance changes temperature due to the gain or loss of heat171
9876617694high specific heatproperty of water in which water changes temperature very slowly with changes in heat due to hydrogen bonding172
9876617695evaporative coolingwater carries the heat it absorbs away in sweat due to its high specific heat173
9876617696heat of fusionthe energy required to change water from a solid to a liquid174
9876617697heat of vaporizationthe energy required to change water from a liquid to a gas175
9876617698the reason why water has a high specific heatit takes a large amount of energy to break the hydrogen bonds that hold water molecules together176
9876617699the temperature stays the samewhat happens to the temperature of water when it changes states - from solid to liquid or from liquid to gas177
9876617700the reason ice floats in liquid waterless dense as a solid; hydrogen bonds form crystalline structure that keeps the water molecules separate178
9876617701reasons why ice floating is important to lifefloating ice keeps the water below it from freezing; if ice would sink, it would remain frozen eventually freezing the entire body of water179
9876617702cohesionthe attraction of like substances; water molecules are attracted to other water molecules; this is due to the hydrogen bonding between water molecules180
9876617703the reason insects can walk on the surface of watersurface tension caused by the cohesion of water molecules181
9876617704adhesionthe attraction of unlike molecules; water molecules are attracted to other polar surfaces182
9876617705the reason water moves from the roots to the leaves of a plantcapillary action due to water adhering to the walls of a narrow tube an rising up (adhesion)183
9876617706matteranything that has mass and takes up space184
9876617707elementMatter in its simplest form185
9876617708atomSmallest form of an element that still displays its particular properties; consisting of a positively charged nucleus and a negatively charged electron cloud.186
9876617709protonsAtomic particles with a positive charge (+) found in the nucleus of an atom.187
9876617710neutronsAtomic particles with a neutral (o) charge found in the nucleus of an atom.188
9876617711electronsAtomic particles with a negative charge (-) found outside the nucleus of an atom.189
9876617712*ion*atom becomes charged when it gains or loses an electron190
9876617713*cation*a positively charged ion; "pawsitive"191
9876617714*anion*a negatively charged ion; ANegative ion192
9876617715chemical bondattraction between two atoms by transferring or sharing electrons to attain a stable electron configuration193
9876617716*molecules*a stable association of two or more atoms held together by chemical bonds;194
9876617717*compound*a molecule made of more than one type of element195
9876617718*organic compound*compounds that contain carbon196
9876617719inorganic compoundcompounds that do not contain carbon197
9876617720*functional group*groups of atoms that are responsible for the chemical properties of organic compounds198
9876617721the interaction of electrons between atomsThe reason chemical bonds form.199
9876617722electronegativityThe ability of an atom to attract electrons.200
9876617723*ionic bond*Bond that forms when one or more electrons are transferred from one atom to another.201
9876617724*covalent bond*Bond that forms when electrons between atoms are shared.202
9876617725nonpolar covalent bondBond that forms when electrons are shared equally.203
9876617726*polar covalent bond*Bond that forms when electrons are shared unequally; like that between the oxygen atom and hydrogen atoms in a water molecule204
9876617727*single covalent bond*Bond when sharing two electrons.205
9876617728*double covalent bond*Bond when sharing four electrons.206
9876617729*triple covalent bond*Bond when sharing six electrons.207
9876617730*hydrogen bond*A weak bond formed between molecules.208
9876617731octet rulean atom will lose, gain, or share electrons in order to achieve a stable configuration of eight electrons in its outermost shell209
9876617732transferredElectrons are ___________ when there are large differences in electronegativities between atoms.210
9876617733sharing; polar covalent bondsSmall differences in electronegativity result in the unequal ___________ of electrons, forming _____________.211
9876617734Mono-Zach-and Cody ride in a Carmonosacharides make up carbohydrates212
9876617735IonsCations are pawsitive, anion stands for "A Negative ion213
9876617736CHOelements that make up carbohydrate - Carbon, Hydrogen, Oxygen214
9876617737CHOelements that make up lipids, Carbon, Hydrogen, Oxygen215
9876617738CHONelements that make up proteins, Carbon, Hydrogen, Oxygen, Nitrogen216
9876617739CHOPNelements that make up nucleic acids, Carbon, Hydrogen, Oxygen, Nitrogen, Phosphorus217
9876617740HONCHydrogen makes 1 covalent bond, Oxygen makes 2 covalent bonds, Nitrogen makes 3 covalent bonds, Carbon makes 4 covalent bonds218

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