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AP Biology: Chapter 17 (gene to protein) Flashcards

From Gene to Protein

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8525523406Gene Expressionprocess by which DNA directs synthesis of proteins0
8525523407Transcription-synthesis of RNA under direction of DNA -DNA serves as template for assembling complementary RNA molecule -resulting RNA molecule faithful transcript of gene's protein-building instructions -occurs in nucleus1
8525523408Messenger RNA (mRNA)RNA molecule that carries genetic message from DNA to protein synthesizing machinery of cell2
8525523409Translation-synthesis of polypeptide -occurs under direction of mRNA -change in language-cell must translate base sequence of mRnA molecule into amino acid sequence of polypeptide -occurs in cytoplasm3
8525523410Ribosomes-sites of translation -complex particles that facilitate orderly linking of amino acids into polypeptide chains4
8525523411Primary Transcriptinitial RNA transcript from any gene, including those coding for RNA that is not translated into protein5
8525523412Triplet Codegenetic instructions for polypeptide chain written in DNA as series of non-overlapping, 3 nucleotide words6
8525523413Template StrandDNA strand that provides pattern/template for sequence of nucleotides in RNA transcript7
8525523414CodonsmRNA base triplets written 5'-3' direction8
8525523415Reading Framegrapings w/ symbols w/ message that needs to be translated to written language9
8525523416RNA Polymerase-pries 2 strands of DNA apart -joins RNA nucleotides as they base pair along DNA template -assemble polynucleotides 5' -> 3' -can start chain from scratch-no primer needed10
8525523417PromoterDNA sequence where RNA polymerase attaches and initiates transcription11
8525523418Terminatorsequence that signals end of transcription in bacteria12
8525523419Transcription Unitstretch of DNA transcribed into RNA molecule13
8525523420Transcription Factorsproteins that mediate binding of RNA polymerase and initiation of transcription14
8525523421Transcription Initiation Complexcomplex of transcription factors and RNA polymerase II bound to promoter15
8525523422TATA Boxcrucial promoter DNA sequence16
8525523423RNA Processingenzymes in eukaryotic nucleus modify pre-mRNA in specific ways before genetic messages dispatched to cytoplasm17
85255234245' Capmodified form of guanine added onto 5' end after transcription 1. facilitates export of mature mRNA from nucleus 2. helps protect mRNA from degradation by hydrolytic enzymes 3. helps ribosomes attach to 5' end of mRNA once mRNA reaches cytoplasm18
8525523425poly-A Tail-50-250 more A nucleotides added to 3' end by enzyme 1. facilitates export of mature mRNA from nucleus 2. helps protect mRNA from degradation by hydrolytic enzymes 3. helps ribosomes attach to 5' end of mRNA once mRNA reaches cytoplasm19
8525523426RNA splicingremoval of large portions of RNA molecule initially synthesized20
8525523427Intronsnoncoding segments of nucleic acid that lie between coding regions21
8525523428Exonsnucleotide regions that are expressed, usually translated into amino acid sequences22
8525523429Spliceosomeinteracts w/ certain sites along introns, releasing intron and joining together 2 exons that flanked intron23
8525523430RibozymesRNA molecules that function as enzymes, can b/c: 1. RNA single stranded, region of RNA molecule may base-pair w/ complementary region elsewhere in same molecule-gives molecule particular 3D structure-essential to catalytic function of ribozymes, just like in enzymatic proteins 2. some RNA bases have functional groups that may participate in catalysis 3. ability of RNA to hydrogen bond w/ other nucleic acid molecules-adds specificity to catalytic activity24
8525523431Alternative RNA Splicingmany genes can give rise to 2+ polypeptides, depending on which segments are treated as exons during RNA processing -# different protein products > # genes25
8525523432Domainsfunctional regions part of protein architecture26
8525523433Transfer RNA (tRNA)transfer amino acids from cytoplasmic pool of AA to ribosome27
8525523434Anticodonnucleotide triplet that base pairs of complementary codon of mRNA28
8525523435Aminoacyl tRNA Synthetases-able to bind to different tRNAs that code for specific amino acid -catalyzes covalent attachment to tRNA -> aminoacyl tRNA released from enzyme -available to deliver AA to growing polypeptide chain of ribosome29
8525523436Wobbleflexible base pairing at codon position30
8525523437Ribosomal RNA (rRNA)made in nucleolus, make up ribosomal subunits31
8525523438P Site (peptidyl-tRNA site)holds tRNA carrying growing polypeptide chain32
8525523439A Site (aminoacyl-tRNA site)holds tRNA carrying next AA to be added in chain33
8525523440E Site (exit site)where discharged tRNAs leave ribosome34
8525523441Release Factorprotein that binds to stop codon @ A site35
8525523442Polyribosomes-strings of ribosomes trailing along mRNA -enables cells to make many copies of polypeptide quickly36
8525523443Signal Peptide-targets protein to ER -marks if polypeptide of proteins destined for endomembrane system or for secretion37
8525523444Signal Recognition Particle (SRP)brings ribosome to receptor protein into ER membrane38
8525523445Signal Mechanism for Targeting Proteins to ER1. polypeptide synthesis begins on free ribosome in cytosol 2. SRP binds to signal peptide, halting synthesis momentarily 3. SRP binds to receptor proteins in ER membrane (receptor is part of protein complex w/ membrane and signal cleaving enzyme) 4. SRP leaves, and polypeptide synthesis resumes w/ simultaneous translocation across membrane (signal peptide stays attached to translocation complex) 5. signal cleaving enzyme cuts off signal peptide 6. rest of complexed polypeptide leaves ribosome and folds into final conformation39
8525523446Mutations-change into genetic information of cell -responsible for huge diversity of genes found along organisms40
8525523447Point Mutations-chemical changes in a single base pair of a gene -if occurs in a gamete, can be transmitted to offspring and future generations41
8525523448Base Pair Substitutionsreplacement of one nucleotide and its partner w/ another pair of nucleotides42
8525523449Missense Mutations-change one amino acid to another -new amino acid may have properties similar to replaced amino acid, or may be in region where exact sequence of amino acids not essential to proteins functions43
8525523450Nonsense Mutation-change codon for amino acid into stop codon -causes translation to be terminated prematurely -resulting polypeptide shorter than polypeptide encoded by normal gene44
8525523451Insertionsadditions of nucleotide pairs in gene45
8525523452Deletionlosses of nucleotide pairs in gene46
8525523453Frameshift Mutations-# nucleotides inserted/deleted NOT multiple of 3 -may alter reading frame of genetic message47
8525523454Mutagenphysical and chemical agents that interact w/ DNA that cause mutations48
8525523455rRNAmakes up 60% of the ribosome; site of protein synthesis49
8525523456geneequals one RNA molecule50
8525523457snRNAsmall nuclear RNA51
8525523458srpRNAsignal recognition particle that binds to signal peptides52
8525523459RNAiInterference RNA53
8525523460ribozymeRNA molecule that functions as an enzyme54

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