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AP Biology: Protein structure and Enzymes Flashcards

THE STRUCTURE AND FUNCTION OF MACROMOLECULES

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8393884890enzymeA macromolecule serving as a catalyst, a chemical agent that changes the rate of a reaction without being consumed by the reaction.0
8393884891polypeptideA polymer (chain) of many amino acids linked together by peptide bonds.1
8393884892proteinA functional biological molecule consisting of one or more polypeptides folded and coiled into a specific three-dimensional structure.2
8393884893amino acidAn organic molecule possessing both carboxyl and amino groups. Amino acids serve as the monomers of polypeptides.3
8393884894peptide bondThe covalent bond between the carboxyl group on one amino acid and the amino group on another, formed by a dehydration reaction.4
8393884895primary structureThe level of protein structure referring to the specific sequence of amino acids.5
8393884896secondary structureThe localized, repetitive coiling or folding of the polypeptide backbone of a protein due to hydrogen bond formation between constituents of the backbone.6
8393884897Alpha helixA spiral shape constituting one form of the secondary structure of proteins, arising from a specific pattern of hydrogen bonding.7
8393884898Beta pleated sheetOne form of the secondary structure of proteins in which the polypeptide chain folds back and forth. Two regions of the chain lie parallel to each other and are held together by hydrogen bonds.8
8393884899tertiary structureIrregular contortions of a protein molecule due to interactions of side chains involved in hydrophobic interactions, ionic bonds, hydrogen bonds, and disulfide bridges.9
8393884900disulfide bridgesA strong covalent bond formed when the sulfur of one cysteine monomer bonds to the sulfur of another cysteine monomer.10
8393884901quaternary structureThe particular shape of a complex, aggregate protein, defined by the characteristic three-dimensional arrangement of its constituent subunits, each a polypeptide.11
8393884902denaturationIn proteins, a process in which a protein unravels and loses its native shape, thereby becoming biologically inactive; in DNA, the separation of the two strands of the double helix. Denaturation occurs under extreme (noncellular) conditions of pH, salt concentration, and temperature.12
8393884903chaperoninA protein molecule that assists in the proper folding of other proteins.13
8393884909active siteThe specific portion of an enzyme that attaches to the substrate by means of weak chemical bonds.14
8393884910enzyme substrateThe reactant that an enzyme acts on15
8393884911catalyst(chemistry) a substance that initiates or accelerates a chemical reaction without itself being affected16
8393884912induced-fit modelTheory that suggests that when an enzyme and a substrate bind together, the enzyme is induced to alter its shape for a tighter active-site/substrate attachment, which places the substrate in a favorable position to react more quickly.17
8393884913CofactorsMinerals that assist in the normal functioning of enzymes18
8393884914coenzymesvitamins that assist in the normal functioning of enzymes19
8393884915allosteric enzymesThe modification of enzyme activity through interactions of molecules with specific sites on the enzyme other than the active site (called allosteric sites)20
8393884916feedback inhibitionA method of metabolic control in which the end product of a metabolic pathway acts as an inhibitor of an enzyme within that pathway.21
8393884917competitive inhibitionInhibition of an enzyme's ability to catalyze a chemical reaction via a non-reactant molecule that competes with the substrate(s) for access to the active site.22
8393884918noncompetitive inhibitionA substance that reduces the activity of an enzyme by binding to a location remote from the active site, changing its conformation so that it no longer binds to the substrate.23

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