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AP Biology Proteins Flashcards

For the AP Exam, students need to be able to identify the structure of an amino acid, and the primary, secondary, tertiary, and quaternary structures of proteins.

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7358173848*proteins*a macromolecule made chains of amino acids0
7397543287*Carbon, Hydrogen, Oxygen, Nitrogen (CHON)*elements that make up a protein1
7358177816categories of proteinsstructural proteins, storage proteins, transport proteins, defensive proteins, and enzymes2
7358467726*enzymes*proteins that speed up chemical reactions (reduce the activation energy required)3
7358470858defensive proteinsproteins that recognize and respond to particles that invade the organism such as antibodies4
7358478263hormonal and regulatory proteinsproteins that control physiological processes such as insulin5
7358482854receptor proteinsproteins that receive and respond to molecular signals from inside and outside the cell6
7358489181storage proteinsproteins that store chemical building blocks for later use7
7358492221structural proteinsproteins that provide physical stability such as collagen8
7358495085transport proteinsproteins that carry substances within the organism, such as hemoglobin9
7358499681genetic regulatory proteinsproteins that regulate how, when, and to what extent a gene is expressed10
7358202515*amino acid*building block (monomer) of proteins, composed of an amino group and a carboxyl group, a hydrogen atom, and an R-group11
7397562072*a carboxyl group, an amino group, a central Carbon, a Hydrogen, and an R-group*structure of an amino acid12
7358240130*20*the number of different amino acids that occur extensively in all living organisms13
7358253032glycinethe simplest amino acid, with a Hydrogen atom for the R-group; small enough to fit into tight corners in the interior of a protein molecule14
7358526356prolineamino acid that lack a hydrogen atom in the amino group resulting in a ring structure; often functions to stabilize bends or loops in proteins15
7358538557cysteineamino acid that has a terminal sulfhydrl group, and can react with another cysteine and form a disulfide bridge16
7358544511disulfide bridgecovalent bond formed between two cysteine amino acids when their SH groups become oxidized; this helps determine how a protein folds17
7358235881*dehydration synthesis*process that bond an amino acid to another amino acids (forms peptide bond)18
7358550897oxidizationrefers to a molecule that has lost electrons19
7358555825reductionrefers to a molecule that has gained electrons20
7358641918LEO (the lion) says GERLEO- loss of electrons is oxidation GER- gain of electrons is reduction21
7358220046*peptide bond*covalent bond formed between amino acids22
7358452786*from amino group to carboxyl group (N-C-C+N-C-C)*order that the amino acids join together23
7358225084*polypeptide chain*a long line of amino acids bonded together by peptide bonds24
7358210096*R-group*stands for the rest of the compound, different for each kind of amino acid, giving the amino acid its properties25
7358273491*properties the R-group may give the amino acid*hydrophilic or hydrophobic, polar or nonpolar, acidic or basic26
7358208510side chainanother name for the R-group27
7358280558four levels of a proteins structureprimary structure, secondary structure, tertiary structure, quaternary structure28
7358286693*primary structure*the order of amino acids in a peptide chain that makes up a protein29
7358309083*secondary structure*three-dimensional shape that occurs from the hydrogen bonding between the amino and carboxyl groups (the backbone) of nearby amino acids; may be shaped as an alpha helix or a beta pleated sheet30
7358332399alpha helixsecondary structure of an amino acid shaped like a spiral31
7358337332beta pleated sheetsecondary structure of an amino acid shaped like pleats on a skirt32
7358324733fibrous proteinsproteins whose shapes are dominated by beta pleated sheet or alpha helix, like collagen33
7358346302*tertiary structure*additional three dimensional shaping to a secondary structure due to interactions of the R-groups34
7358353981globular proteinsproteins whose shape is dominated by the additional three-dimensional shaping of a tertiary structure, like hemoblobin35
7358621195*denatured*a change in the shape of a protein due to chemical treatments, temperature, change of pH, or high concentrations of polar or nonpolar substances; may or may not be irreversible36
7358374796*quaternary structure*a protein that is assembled from two or more peptide chains; hemoglobin consists of four peptide chains that are held together by hydrogen bonding and interactions among R-groups37
7358590304*hydrogen bonds*bond that occurs between R-groups that stabilize folds in proteins38
7358594983*hydrophobic R-groups*move together to the interior of a protein, away from water39
7358604523van der Waals interactionsbond-like interaction that stabilize nearby hydrophobic R-groups40
7358608019ionic interactionsbond that forms between oppositely charged (positive and negative) R-groups41
7358616221salt bridgeanother name for ionic interactions that occur between oppositely charged (positive and negative) R-groups42

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