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Biochemistry Flashcards

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8075999973Macromoleculessmaller organic molecules join together to form larger molecules0
80760350164 major macromolecule classescarbohydrates, lipids, proteins, nucleic acids1
8076035017Polymerslonger molecules built by linking repeating building blocks in a chain - many monomer2
8076077881Dehydration Synthesis- joins monomers by "taking" H2O out - one monomer donates OH- - other monomer donates H+ - together these form H2O - Condensation reaction3
8076094535Digestion/ Hydrolysis- use H2O to breakdown polymers - revers of dehydration synthesis - cleave off on monomer at a time - H2O is split into H+ and OH attach to ends4
8076115912Carbohydrates- carbohydrates are composed of C,H,O5
8076126300Carbohydrates Function- Energy --> ATP - Energy storage - raw materials - structural materials: cyton, cellulose6
8076137524monomer of Carbohydratessugar7
8076139555Sugars- most end in -ose - classified by number of carbons8
8076142258Monosaccharides- simple 1 monomer sugars - glucose9
8076146085Disaccharides- 2 monomer sugars - sucrose10
8076149122Polysaccharides- polymers of sugar - cost little energy to burn11
8076165575Function of sugars- energy storage - starch, glycogen12
8076172399Linear polysaccharidesstarch - easy to digest13
8076176545Branched polysaccharides- Glycogen - hard to digest14
8076192452Cellulose- most abundant organic compound on Earth - herbivores have envolved mechanism to digest i - most carnivores can not digest it15
8076200136Proteins- structurally and functionally diverse16
8076217874Function of proteins- enzymes (pepsin, DNA polymerase) - structure (keratin, collagen) - carries and transport (hemoglobin, aquaporin) - defence antibodies - movement - muscle17
8076243346Structure of Protein- monomer = amino acid - polymer = polypeptide chain = protein - 20 different amino acids - protein can be one or more polypeptide chains folded and bonded together18
8076279882Amino acid- central carbon + amino group + carboxyl group (acid) + R group (side chain)19
8076311339R chainVariable group gives it chemical distinction20
8076320755Building proteins- monomers (amino acids) make up the polymer (protein) - peptide bonds: covalent binds between NH2 (amine) of one amino acid and COOH - Polypeptide chains have directions - N-terminus = NH2 end (amino acid) - top - C-terminus = COOH end - bottom - Repeated sequence (N-C-C) is the polypeptide backbone - Function depends on structure --> 3-D structure --> twisted, folded, coiled into unique shape21
8076369529N-terminusNH2 end (amino acid) - top22
8076371411C-terminusCOOH end - bottom23
8076375307Primary structure- order of amino acids in chain - Amino acid sequence determined by gene (DNA) - Slight change in amino acid sequence can affect protein´s structure and its function24
8076393718Secondary folding- local folding - folding along short sections of polyptide - interactions between adjacent amino acid - forms sections of DNA - alpha helix - beta pleated sheets25
8076419289Tertiary structure- whole molecule folding - interactions between distant amino acids - the structure of a protein that occurs due to interactions between R groups26
8076454474Quaternary structure- more than one polypeptide chain bounded together - then does polypeptide become functional protein27
8076580988Denaturation- unfolding of protein - reasons: temperature, pH, salinity - alters 2 and 3 structure - denatured protein is looser and at a more random state28
8076591994Lipids- composed of C,H,O29
8076596428Family groups of lipidsfats, phospholipids, steroids30
8076604931Fats- fatty acid - long HC "tail" with carboxyl (COOH) group "head" formed through dehydration synthesis - long HC chain is non polar (hydrophobic)31
8076637123Function of fatsenergy storage - concentrated within HC chain - cushion organs - insulation body32
8076674722saturated fats- all C binded to H - No C=C double bondsC - long straight chains - most animal fat - solid at room temp. - contributes to cardiovascular diseases33
8076776175unsaturated fats- C=C double binds in fatty acids - plant and fish fats - vegetable oils - liquid at room temperature34
8076803325Phosphor lipids- structure: glycerol and 2 fatty acids and PO4 - PO4 negatively charged - Fatty acid tails = hydrophobic - PO4 head = hydrophilic . split sides35
8076831089amphipathichydrophilic and hydrophobic36
8076944603Phospholipids in water-hydrophilic heads "attracted to H2O - hydrophobic tails "hide" from H2O -can self-assemble into bubbles - semipermeable membrane37
8076957697Steroids Structure- 4 fused Carbon rings + something else - different steroids created by attaching different groups to rings - different structure created different function38
8076978378Cholesterol- important cell component - animal cell membranes - high concentration to cardiovascular disease - more cholesterol the more fluid the cell membrane --> nothing can go through membrane - regulating molecules entering and exiting the cell39
8077042957cell membrane permitted and not- small lipids can move through - sugar (polar) therefore cannot go through - water, salt is blocked - polar waste is blocked - bilayer is impermeable to polar substances40
8077105260cell membrane channels- Membranes becomes semi-preambles via protein channels - each channel is very specific - Proteins determine membrane´s specific functions41
8077135376Functions of Membrane of Proteins- transporters, enzyme activity, cell surface receptors, cell surface identity maker, cell adhesion, attachment to the cytoskeleton42
8077168373Classes of membrane proteinsPeripheral proteins, Integral proteins43
8077174972Peripheral proteins- loosely bound to surface membrane - Cell surface identity marker - help with transport or communication44
8077178462Integral proteins- pentrate lipid bilayer usually across whole membrane - transmembrane proteins - transport proteins; channels, permeases (pumps)45
8077241953Diffusion- 2nd Law of Thermodynamics - concentration gradient46
8077282985Simple diffusion- move from high to low concentration - diffusion of non polar, hydrophobic molecules - passive transport - no energy needed47
8077302867Facilitated Diffusion- diffusion through protein channels - channels move specific molecules across membrane - no energy needed - diffusion of polar, hydrophilic molecules48
80760294794 major macromolecule classescarbohydrates, lipids, proteins, nucleic acids49
8076029480Active Transport- cells may need to move molecules against concentration gradient - protein pump - allosteric change in protein (different shape when engulfing) - requires ATP - against concentration gradient50
8076024524allosteric changedifferent shape when engulfing51
8076024525Antiporttwo molecules are transported to opposite sides52
8076019787Symporttwo molecules are transported to the same side53
8076019788Endocytosis (3)- Phagocytosis: fuse with lysosome for digestion - Pinocytosis: non-specific process - Receptor-mediated endocytosis54
8076014066Phagocytosisfuse with lysosome for digestion a.Engulfing something large b.Cellular eating c.Specific d.Example: macrophages, neutrophils (immune system)55
8076011076Pinocytosisnon-specific process - cellular drinking56
8082235156Receptor-mediated endocytosistriggered by molecular signal a.Highly specific b.Lock and key process c.Example: LDL (low density lipids), certain molecules which are needed in the nucleus - signal transduction pathway d.Bind to receptors on membrane e.As a certain number of molecules are attached to receptors the pit deepens57
8082239826Exocytosisvesicle is leaving the membrane - cellular waste58
8082242906Osmosis- diffusion of water - following 2nd law of thermodynamics59
8082250631Hypotonic solutionless solute) less concentration of molecules and more concentration of water60
8082252949Hypertonic solution(more solute) more concentration of molecules and less concentration of water61
8082269572Isotonicconcentrations are equal62
8082280520plant cells osmosis-normal state is turgid (Hypotonic solution) -Flaccid: not as stable (Isotonic solution) -Plasmolysis: membrane will pull away from wall (Hypertonic solution)63
8082282237animals cells osmosis-Lysed: cell bursts (Hypotonic solution) -Normal: Isotonic solution -Shrivelled: Hypertonic solution64
8082290028Why are cell so small-The greater the surface area the more surface for diffusion to go across -The larger the surface area to volume ratio the faster the rate of diffusion into a cell65
8083978974Types of microscopy-Light microscope -Electron microscope -Scanning electron microscope -Transmission electron microscope66
8083981779cell theory- cell come from other cells - living things are made from cells67
8083985586Characteristics of life (MRS GREN)- Communication - Reproduction - Order - Growth and development - Energy processing - Regulation - Response to environment - Evolutionary adaption68
8084008257surface:volume ratioSmaller cells can diffuse more at a faster rate because of their higher surface to volume ratio69
8084013251Prokaryotic cells- bacteria and Archea70
8084013252Eukaryotic cells- smaller and simpler - protists, plant, fungi, animal - membrane enclosed nucleus71
8084024476Similarities between Eukaryotic and Prokaryotic cell-Cytosol -Chromosomes -Ribosomes -cytoplasm72
8084028103Plant vs Animal cell similarities-membrane bound organelles such as nucleus, mitochondria, endoplasmic reticulum, goldi apparatus, lysosomes -similar membranes, cytosol and cytoskeleton73
8084032294Plant differences-larger than animal cells -chloroplasts -Vacuoles -Cell wall74
8084059784Mitochondriacarry out cellular respiration75
8084061432Chloroplastphotosynthesizing organelles of plants and algea76
8084064654Nucleuscontains cell´s genetic instructions encoded in DNA - directing protein synthesis77
8084069590Ribosomesmake proteins78
8084071314endoplasmic reticuluman internal membrane system in which components of cell membrane and some proteins are constructed79
8084081159Endosymbiotic theorystates that mitochondria and chloroplasts were formerly small prokaryotes that began living within lager cells80
8084233058cytoskeletonjelly like fluid that fills a cell81
8084236073flagella and ciliaprotude cell membrane and make wave like motions82
8084242157flagellalong and few83
8084243958ciliashort and many84
8084260964Extracellular matrix- hold cell together - made of glycoproteins85
8084263693Glycoproteinscarbon with protein86
8084267106cell junction-consist of multiprotein complexes -provide contact between neighbouring cells or between a cell and the extracellular matrix87
8084327876Fluid-mosaic model of cell membranesflexible layer made of lipid molecules is interspersed with large protein molecules that act as channels through which other molecules enter and leave the cell88
8084342224Types of protein in membrane-Transporter -Enzyme activity -Cell surface receptor -Cell surface identity marker -Cell adhesion -Attachment to the cytoskeleton89
8084345651Transporter proteinallows substances to cross the membrane through a channel in its interior90
8084347448Amphipathichydrophilic ("water-loving") or polar end and a hydrophobic ("water-fearing") or nonpolar end91
8084375005What can go through the membrane?small nonpolar molecules92
8084439436Spontaneous membrane formation- phospholipids can self assemble into simple molecules - a membrane can enclose a solution that differs from its surrounding - basic requirement of life: plasma membrane that allows cells to regulate their chemical exchanges with the environment93
8084456265Aquaporinform pores in the membranes of cells and selectively conduct water molecules through the membrane, while preventing the passage of ions94
8084457999Ion channel-ability to open and close in response to chemical or mechanical signals -open: ions move through channel in single line fashion -ion channels are specific to particular ions95
8084460551Water potentialpotential energy in water - how willing is it to move96
8084463880Water potential equationWater potential = Solution potential + pressure potential97
8084468292Solution Potential-iCRT98
8084470758Gibbs Free Energy eqΔG = ΔH - TΔS99
8084472346Gibbs Free EnergyThe energy of a system available to do work100

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