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Biochemistry - Genetics Flashcards

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10161987813-Sons of heterozygous mothers have a 50% chance of being affected. -No male-to-male transmission. -*Skips generations*.X-linked recessive0
10161989280X-linked recessive - Examples*O*blivious *F*emale *W*ill *O*ften *G*ive *H*er *B*oys *H*er x-*L*inked *D*isorders: -*O*rnithine transcarbamylase deficiency -*F*abry disease -*W*iskott-Aldrich syndrome -*O*cular albinism -*G*6PD deficiency -*H*unter syndrome -*B*ruton agammaglobulinemia -*H*emophilia A and B -*L*esch-Nyhan syndrome -*D*uchenne (and Becker) muscular dystrophy1
10162023445Females with ......... are more likely to have an X-linked recessive disorder.Turner syndrome (45,XO)2
12785180802X-inactivation (lyonization)-One copy of female X chromosome forms a transcriptionally inactive Barr body. -Female carriers variably affected depending on the pattern of inactivation of the X chromosome carrying the mutant vs normal gene.3
10162037002-Transmitted only through the *mother.* -*All offspring* of affected females may show signs of disease. -Variable expression in a population or even within a family due to *heteroplasmy.*Mitochondrial inheritance4
10162042082Mitochondrial myopathies - Muscle biopsy*"ragged red fibers"* (due to accumulation of diseased mitochondria in the subsarcolemma of the muscle fiber)5
10162054309Mitochondrial inheritance - Examples1) Mitochondrial myopathies -*MELAS* syndrome (*m*itochondrial *e*ncephalomyopathy, *l*actic *a*cidosis, and *s*troke-like episode -*MERRF* syndrome (*m*yoclonic *e*pilepsy with *r*agged *r*ed *f*ibers) 2) Leber hereditary optic neuropathy: bilateral vision loss6
10162080750Autosomal dominant diseases - Examples-*Familial adenomatous polyposis* -*Huntington* disease -Multiple endocrine neoplasias (*MEN*) -*Achondroplasia* -Most neurocutaneous disorders > *Neurofibromatosis* type 1 and type 2 > Tuberous sclerosis > von Hippel-Lindau disease7
10162120977Autosomal recessive diseases - Examples-Often due to *enzyme deficiencies* > *phenylketonuria* > *galactokinase deficiency* > *classic galactosemia* > glycogen storage diseases -*Cystic fibrosis* -*Sickle cell* anemia -Thalassemias8
10162561933Most common lethal genetic disease in Caucasian populationCystic fibrosis9
10162570651Cystic fibrosis - Genetics-*Autosomal recessive* -Defect in *CFTR* gene on chromosome 7 (commonly a deletion of ΔF508)10
10162581517CFTR gene encodes ...........*ATP*-gated Cl− channel that -*secretes* Cl− in lungs and GI tract -*reabsorbs* Cl− in sweat glands11
10162566635Cystic fibrosis - Pathophysiology1) Most common mutation (deletion of ΔF508) 2) *Misfolded protein* --- protein retained in RER and *not transported* to cell membrane 3) Decreased Cl− (and H2O) secretion 4) Compensatory *increased Na+ reabsorption* via ENaC (causes *more negative transepithelial potential difference*) 5) Increased H2O reabsorption 6) *Abnormally thick mucus* secreted into lungs and GI tract12
10162712234Cystic fibrosis - Diagnosis1) *High Cl− concentration* in pilocarpine-induced *sweat test* is diagnostic 2) *More negative transepithelial potential difference* 3) Contraction alkalosis and hypokalemia (because of ECF H2O/Na+ losses via sweating and concomitant renal K+/H+ wasting) 4) High immunoreactive trypsinogen (newborn screening)13
10162794761Cystic fibrosis - Complications1) *Recurrent pulmonary* infections (eg, S aureus [infancy and early childhood], *P aeruginosa* [adulthood]), chronic bronchitis and bronchiectasis --- reticulonodular pattern on CXR, opacification of sinuses. 2) Nasal polyps 3) *Clubbing* of nails 4) *Chronic pancreatitis*, *pancreatic insufficiency*, malabsorption with steatorrhea, *fat-soluble vitamin deficiencies (A, D, E, K)* 5) Biliary cirrhosis, liver disease. 6) Meconium ileus in newborns. 7) *Infertility* in men (*absence of vas deferens*, spermatogenesis may be unaffected) and subfertility in women (amenorrhea, abnormally thick cervical mucus). 8) *Hyponatremia* (due to excessive salt wasting from sweat)14
10162837869In cystic fibrosis, thick, viscous secretions in the lumen of the pancreas --- ............*obstruction*, inflammation --- *chronic pancreatitis*, fibrosis15
10162851103Cystic fibrosis treatment in patients with ΔF508 deletioncombination of -lumacaftor (corrects misfolded proteins and improves their transport to cell surface) -ivacaftor (opens Cl- channels --- improved chloride transport)16
10162859536......... slows disease progression in cystic fibrosis.Ibuprofen17
10162943052Duchenne muscular dystrophy - Pathophysiology*X-linked* disorder *Frameshift* deletions or *nonsense* mutations --- truncated or absent *dystrophin* protein --- progressive myofiber damage18
10162964641Duchenne muscular dystrophy - Presentation/FindingsOnset before 5 years of age. 1) Weakness begins in *pelvic girdle* muscles and progresses superiorly. 2) *Pseudohypertrophy* of calf muscles due to *fibrofatty replacement* of muscle 3) Waddling gait 4) *Gowers sign:* patient uses upper extremities to help stand up 5) Asymmetric weakening of the paraspinal muscles --- *Kyphoscoliosis* 6) High *CK* and aldolase19
10162983443Dystrophin - Functions-Helps anchor muscle fibers, primarily in skeletal and cardiac muscle. -It connects the *intracellular cytoskeleton (actin)* to the *transmembrane proteins* α- and β-dystroglycan, which are connected to the extracellular matrix (ECM).20
10163009162Gowers sign seen in ..........Classically seen in *Duchenne* muscular dystrophy, but also seen in other muscular dystrophies and inflammatory myopathies (eg, polymyositis)21
10163005670Becker muscular dystrophy - Pathophysiology*X-linked* disorder *Nonframeshift* deletions in *dystrophin* gene (partially functional instead of truncated).22
10163030451Becker muscular dystrophy - Presentation/Findings-*Less severe* than Duchenne. -Onset in adolescence or early adulthood. -*Gower sign:* patient uses upper extremities to help stand up23
10163045142-Autosomal dominant. -*CTG* trinucleotide repeat expansion in the DMPK gene --- abnormal expression of myotonin protein kinase --- myotonia (eg, difficulty releasing hand from handshake), muscle wasting -*CTG:* *C*ataracts, *T*oupee (early *balding* in men), *G*onadal atrophy*Myotonic dystrophy type 1*24
10163083386-Sporadic disorder seen almost exclusively in *girls* (affected males die in utero or shortly after birth). -Most cases are caused by de novo mutation of MECP2 on X chromosome. -Symptoms usually appear between ages *1-4*. -Characterized by > *regression* (*Rett*urn) in motor, verbal, and cognitive abilities > ataxia; seizures > *deceleration of head growth* > *stereotyped hand-wringing**Rett* syndrome25
10177162527Fragile X syndrome - Pathophysiology/Genetics> X-linked dominant inheritance. > Trinucleotide repeat (*CGG*) in FMR1 (Fragile X mental retardation 1) gene on the long arm of the X chromosome --- *hypermethylation* --- decreased expression > When the cells of the affected individuals are cultered in a medium, the area of increased repeats does not stain and appears "broken". --- Chromosomal studies typically show a *small gap* near the tip of the *long arm of the X* chromosome.26
10177162528Fragile X syndrome - Presentation*CGG:* *C*hin (long face with a *large jaw*, *large everted ears*) *G*iant *G*onads (post-pubertal *macroorchidism*)27
10177209893Trinucleotide repeat expansion diseases1) Huntington disease: *CAG* (*C*audate has low *A*Ch and *G*ABA) 2) Myotonic dystrophy: *CTG* (*C*ataracts, *T*oupee [early balding in men], *G*onadal atrophy) 3) Fragile X syndrome: *CGG* (*C*hin [protruding], *G*iant *G*onads) 4) Friedreich ataxia: *GAA* (Ataxic *GAA*it)28
10177248663Autosomal trisomies1) *D*own syndrome (trisomy *21*): *D*rinking age (21) 2) *E*dwards syndrome (trisomy *18*): *E*lection age (18). 3) *P*atau syndrome (trisomy *13*): *P*uberty (13)29
10177264401Down syndrome - Presentation1) Intellectual disability 2) *Flat facies* 3) Prominent *epicanthal folds* 4) *Upward-slanting palpebral fissures* 5) Brushfield spots 6) *Protruding tongue* 7) *Short neck* and *generous nuchal skin* 8) *Single palmar crease* 9) Gap between 1st 2 toes 10) Incurved 5th finger 11) *Duodenal atresia* 12) Hirschsprung disease 13) Congenital heart disease (eg, *atrioventricular septal defect*) 14) Associated with early-onset *Alzheimer* disease (chromosome 21 codes for *amyloid precursor protein*) 15) Increased risk of *ALL* and AML30
10177264402Down syndrome - Pathophysiology1) *95%* of cases due to *meiotic nondisjunction* (increases with advanced maternal age; from 1:1500 in women < 20 to 1:25 in women > 45 years old). 2) 4% of cases due to unbalanced *Robertsonian translocation*, most typically between chromosomes *14* and *21*. 3) Only 1% of cases are due to postfertilization mitotic error.31
10177307733The 5 A's of Down syndrome:1) *A*dvanced maternal age 2) *A*tresia (duodenal) 3) *A*trioventricular septal defect 4) *A*lzheimer disease (early onset) 5) *A*ML/*A*LL32
10177264403Down syndrome - Diagnosis1) First-trimester ultrasound: *Increased nuchal translucency* and hypoplastic nasal bone 2) 2nd trimester serum markers: *HI* up -β *h*CG: *high* -*I*nhibin A: *high* -AFP: *low* -Estriol: *low*33
10177266154Edwards syndrome - Presentation*PRINCE* Edward: -*P*rominent occiput -*R*ocker-bottom feet -*I*ntellectual disability -*N*ondisjunction -*C*lenched fists (with overlapping fingers) -low-set *E*ars -*micrognathia* (small jaw) -*congenital heart disease* -omphalocele34
10177346321Edwards syndrome- Diagnosis2nd trimester serum markers: -β hCG: *low* -AFP: *low* -Estriol: low35
10177346322Patau syndrome - Presentation1) micro*P*hthalmia 2) microce*P*haly 3) holo*P*rosencephaly 4) cleft li*P*/*P*alate 5) *P*olydactyly 6) cutis a*P*lasia 7) *P*olycystic kidney disease 8) Om*P*halocele 9) congenital heart disease (*P*ump) 10) severe intellectual disability 11) rockerbottom feet36
10177381896Patau syndrome - Diagnosis1st trimester serum markers: -β hCG: *low* -PAPP-A: *low*37
10181675519-Chromosomal translocation that commonly involves chromosome pairs 13, 14, 15, 21, and 22. -One of the most common types of translocation. -Occurs when the long arms of 2 acrocentric chromosomes (chromosomes with centromeres near their ends) fuse at the centromere and the 2 short arms are lost.Robertsonian translocation38
10181680431Congenital deletion on short arm of chromosome 5 (46,XX or XY, 5p−). Findings: -microcephaly -moderate to severe intellectual disability -high-pitched crying/meowing -epicanthal folds -cardiac abnormalities (VSD).Cri-du-chat syndrome39
10181682602Congenital microdeletion of long arm of chromosome 7 (deleted region includes elastin gene). Findings: -distinctive "elfin" facies -well-developed verbal skills -extreme friendliness with strangers -intellectual disability -hypercalcemia -cardiovascular problems (eg, supravalvular aortic stenosis, renal artery stenosis)Williams syndrome40
1018168900022q11 *microdeletion* syndromes1) *DiGeorge* syndrome: thymic, parathyroid, and cardiac defects. 2) *Velocardiofacial* syndrome: *palate*, cardiac and facial defects.41
1018169249722q11 *microdeletion* syndromes due to ...........aberrant development of *3rd* and *4th* branchial (pharyngeal) *pouches*42
10181696759DiGeorge syndrome - Presentation/Findings1) Thymic aplasia --- *T-cell deficiency* 2) Failure of parathyroid development --- hypocalcemia. 3) Cardiac defects (*Truncus arteriosus*, *tetralogy of Fallot*)43

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