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Chapter 26: Phylogeny and the Tree Life Flashcards

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2151462522PhylogenyThe evolutionary history of a species or group of related species.0
2151464213systematica scientific discipline focused on classification of organisms and determining their evolutionary relationship.1
577823850taxonomya scientific discipline concerned with naming and classifying the diverse forms of life.2
577823851binomiala common term for the two-part, latinized format for naming a species, consisting of the genus and specific epithet; also called a binomen.3
577823852genusa taxonomic category above the specie level, designated by the first word of a species' two part scientific name.4
577823853familyin Linnaean classification, the taxonomic category above the level of genus.5
577823854ordersthe taxonomic classification above the level of family.6
577823855classesin Linnaean classification, the taxonomic category above the level of order.7
577823856phylaIn the Linnaean classification, the taxonomic category above the level of class.8
577823857kingdomsa taxonomic category, the second broadest after domain.9
577823858domainsthe taxonomic category level above the kingdom level. The three domains are Archaea, Bacteria, and Eukarya.10
577823859taxona naming taxonomic unit at any given level of classification.11
577823860phylogenetic treea branching diagram that represents a hypothesis about the evolutionary history of a group of organisms.12
577823861branch pointsthe representation of a phylogenetic tree of the divergence of two or more taxa from a common ancestor. A branch point is usually shown as a dichotomy in which a branch representing the ancestral lineage splits (at the branch point) into two branches, one for each of the two descendant lineages.13
577823862sister taxagroup of organisms that share a common ancestor and hence are each other closest relative.14
577823863rooteddescribing a phylogenetic tree that contains a branch point (often the farthest to the left) representing the most common ancestor of all the taxa in the tree.15
577823864basal taxonin a specific group of organisms, a taxon whose evolutionary lineage diverged early in the history of the group.16
577823865polytomyin the phylogenetic tree, a branch point from which more than two descendants taxa emerge. A polytomy indicates the evolutionary relationship between the descendants taxa are not yet clear.17
577823866analogysimilarities between two species that is due to convergent evolution rather than to descent from a common ancestor with the same trait.18
577823867homoplasiesa similar (analogous) structure or molecular sequence that has evolved independently in two species.19
577823868cladisticsan approach to systematics in which organisms are placed into groups called clades based primarily on common descent.20
577823869cladesa group of species that includes an ancestral species and all of its descendants. A clade is equivalent to a monophyletic group.21
577823870monophyleticpertaining to a group of taxa that consists of a common ancestor and all of its descendants. A monophyletic taxon is equivalent to a clade.22
577823871paraphyleticpertaining to a group of taxa that consists of a common ancestor and some, but not all, of its descendants.23
577823872polyphyleticpertaining to a group of taxa that includes distantly related organisms but does not include their most recent ancestor.24
577823873shared ancestral charactera character, shared by members of a particular clade, that originated in an ancestor that is not a member of that clade.25
577823874shared derived characteran evolutionary novelty that is unique to a particular clade.26
577823875outgroupa species or group of species from an evolutionary lineage that is known to have diverged before the lineage that contains the group of species being studied. An outgroup is selected so that its members are closely related to the group of species being studied, but not as closely related as any study- group members are to each other.27
577823876ingroupa specie or group of species whose evolutionary relationships are being examined in a given analysis.28
577823877maximum parsimonya principle that states when considering multiple explanations for an observation, one should first investigate the simplest explanation that is consistent with the facts.29
577823878maximum likelihoodas applied to DNA sequence data, a principle that states that when considering multiple phylogenteic hypotheses, one should take into account the hypothesis that reflect the most likely sequence of evolutionary events, given certain rules about how DNA changes over time.30
577823879orthologous geneshomologous genes found in different species because of speciation.31
577823880paralogous geneshomologous genes that are found in the same genome as a result of gene duplication.32
577823881molecular clocka method of estimating the time required for a given amount of evolutionary change, based on the observation that some regions of genomes evolve at a constant rate.33
577823882horizontal gene transferthe transfer of genes from one genome to another through mechanisms such as transposable elements, plasmid exchange, viral activity, and perhaps fusions of different organisms.34

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