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Genetics Glossary Flashcards

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6073761826TraitAny observable or measurable characteristic of an individual0
6073761827PhenotypeAn observed category or measured level of performance for a trait in an individual1
6073761828Genetics EquationP= G + E2
6073761829Environmental EffectThe effect that external (nongenetic) factors have on animal performance3
6073761830Biological TypeA classification for animals with similar genotypes for traits of interest4
6073761831SystemA group of interdependent component parts5
6073761832InteractA dependent relationship among components of a system in which the effect of any one component depends on other components present in the system6
6073761833Genotype by Environmental InteractionsA dependent relationship between genotypes and environments in which the difference in performance between two or more genotypes changes from environment to environment (G x E)7
6073761834Breeding ObjectivesA general goal for a breeding program - a notion of what constitutes the best animal8
6073761835BreedA race of animals within a species9
6073761836End UserThe individual whose particular needs should form the basis for determining breeding objectives for breeding stock10
6073761837Germ PlasmGenetic material in the form of live animals, semen, or embryos11
6073761838Commercial ProducersAn animal breeder whose primary product is a commodity for public consumption12
6073761839SeedstockBreeding stock, animals whose role is to be a parent, or in other words, to contribute genes to the next generation13
6073761840PurebredsSeedstock are traditionally producers of these, wholly of one breed or line14
6073761841LineA group of related animals within a breed15
6073761842Intermediate OptimumAn intermediate level of performance that is optimal in terms of profitability and or function (sometimes change it too much)16
6073761843PopulationA group of inter-mating individuals, the term can refer to a breed, an entire species, a single herd or flock, or even a small group of animals within a herd17
6073761844SelectionThe process that determines which individuals become parents, how many offspring they produce, and how long they remain in the breeding population18
6073761845Natural SelectionSelection that occurs in nature independent of deliberate human control (evolutionary force that fuels genetic change)19
6073761846Artificial SelectionSelection that is under human control20
6073761847Replacement SelectionThe process that determines which individuals will become parents for the first time21
6073761848CullingThe process that determines which parents will no longer remain parents22
6073761849AIA reproductive technology in which semen is collected from males, then used in fresh or frozen form to breed females23
6073761850Breeding ValueThe value of an individual as a (genetic) parent - Individuals with the bet sets of genes have the highest breeding value - Parental value - Does not appear in the basic model for quantitative traits24
6073761851Phenotypic Selectionselection based solely on an individual's own phenotype(s), not looking at pedigree or any siblings (simplest form of selection)25
6073761852HeritabilityA measure of the strength of the relationship between breeding values and phenotypic values for a trait in a population (the relationship between phenotype + breeding value)26
6073761853FertilityThe ability (of a female) to conceive or (of a male) to impregnate (heritability is low, more function of environmental effects)27
6073761854Performance TestingSystematic measurement of performance (phenotype) in a population28
6073761855Pedigree DataSelection using information on relatives, information on the genotype or performance of ancestors and or collateral relatives of an individual29
6073761856Progeny DataSelection using information on relatives, information on the genotype or performance of descendants of an individual30
6073761857Genetic PredictionThe area of academic animal breeding concerned with measurement of data, statistical procedures, and computational techniques for predicting breeding values and related values31
6073761858Sire SummaryA list of genetic predictions, accuracy values, and other useful information about sires in a breed32
6073761859Polygenic TraitA trait affected by many genes, no single gene having an overriding influence33
6073761860Simply-Inherited TraitA trait affected by only a few genes34
6073761861Major GeneA gene that has a readily discernible effect on a trait35
6073761862Between-Breed SelectionThe process that determines the breed(s) from which parents are selected (ex. cross breeding)36
6073761863MatingThe process that determines with (selected) males are bred to which (selected) females (different than selection)37
6073761864Mating SystemA set of rules for mating - To produce offspring with extreme breeding value in order to increase the rate of genetic change - To make use of complementarity - To obtain hybrid vigor (heterosis)38
6073761865ComplemetarityImprovement in overall performance of offspring resulting from mating with different but complementary breeding values39
6073761866Hybrid VigorAKA Heterosis, increase in the performance of hybrids over that of purebreds40
6073761867CrossbreedingThe mating of sires of one breed or breed combination to dams of another breed or breed combination41
6073761868InbreedingThe mating of relatives42
6073761869Inbreeding DepressionThe reverse of hybrid vigor43
6073761870Corrective MatingA mating designed to correct in their progeny faults of one or both parents44
6073761871GeneThe basic physical unit of heredity consisting of a DNA sequence at a specific location on a chromosome45
6073761872DNADeoxyribonucleic acid, the molecule that forms the genetic code.46
6073761873ChromosomeOne of a number of long strands of DNA and associated proteins present in the nucleus of every cell47
6073761874HomologsOne of a pair of chromosomes having corresponding loci48
6073761875LocusThe specific location of a gene on a chromosome49
6073761876AllelesAn alternative form of a gene50
6073761877Multiple AllelesMore than two possible alleles at a locus (two separate genes can affect one thing)51
6073761878GenotypeThe combination of genes at a single locus or at a number of loci52
6073761879Homozygous GenotypeA one-locus genotype containing functionally identical genes53
6073761880Heterozygous GenotypeA one-locus genotype containing functionally different genes54
6073761881SegregationThe separation of paired genes during germ cell formation55
6073761882Germ Cell/GameteA sex cell (sperm or egg)56
6073761883MeiosisThe process of germ cell formation57
6073761884Independent AssortmentThe independent segregation of genes at different loci58
6073761885LinkageThe occurrence of two or more loci of interest on the same chromosome59
6073761886Crossing OverA reciprocal exchange of chromosome segments between homologs (occurs during meiosis prior to the time homologous chromosomes are separated to form gametes)60
6073761887RecombinationThe formation of a new combination of genes on a chromosome as a result of crossing over (probability depends on the distance from the loci, the farther the more likely it is to occur)61
6073761888EmbryoAn organism in the early stages of development in the shell or uterus (gametes from the sire and dam combine to form a zygote)62
6073761889ZygoteA cell formed from the union of male and female gametes (this has a full complement of genes, half from the sperm and half from the egg)63
6073761890Gamete SelectionThe process that determines which egg matures and which sperm succeeds in fertilizing the egg (essentially random, all gametes have an equal chance of contributing to a zygote)64
6073761891Punnet SquareTwo-dimensional grid used to determine the possible zygotes from a mating65
6073761892Mendelian SamplingThe random sampling of parental genes caused by segregation and independent assortment of genes during germ cell formation and by random selection of gametes in the formation of the embryo (determines genetic makeup of the offspring, causes issues for breeders trying to get a certain trait)66
6073761893DominanceAn interaction between genes at a single locus such that in heterozygotes one allele has more effect than the other, the allele with the greater effect is dominant over its recessive counterpart67
6073761894Complete DominanceA form of dominance in which the expression of the heterozygote is identical to the expression of the homozygous dominant genotype, classic form of dominance where the heterozygote is the same as the homozygote dominant (JJ = Jj)-- (same phenotypic expression)68
6073761895Partial DominanceA form of dominance in which the expression of the heterozygote is intermediate to the expressions of the homozygous genotypes and more closely resembles the expression of the homozygous dominant genotype (ex. HYPP in horses)69
6073761896No DominanceA form of dominance in which the expression of the heterozygote is exactly midway between the expressions of the homozygous genotypes, neither allele is dominant70
6073761897OverdominanceA form of dominance in which the expression of the heterozygote is outside the range defined by the expressions of the homozygous genotypes and most closely resembles the expression of the homozygous dominant genotype, a superior heterozygote or extreme, most extreme form of dominance71
6073761898EpistasisAn interaction among genes at different loci such that the expression of genes at one locus depends on the alleles present at one or more other loci72
6073761899Breed TrueA phenotype for a simply-inherited trait is said to breed true if two parents with that phenotype produce offspring of that same phenotype exclusively73
6073761900Sex LinkageThe pattern of inheritance for genes located on sex chromosomes (females XX, male XY)74
6073761901HemizygousHaving only one gene of a pair, a gen on the X chromosome of a mammalian male)75
6073761902Sex-Limited InheritanceA pattern of inheritance in which phenotypic expression is limited to one sex (calico cats, milk production)76
6073761903Sex-Influenced InheritanceA pattern of inheritance in which modes of gene expression differs between males and female, an allele may be dominant in males and recessive in females77
6073761904Gene Frequency/Allelic FrequencyThe relative frequency of a particular allele in a population, how common that allele is relative to other alleles that occur at that locus, range from 0-178
6073761905Genotypic FrequencyThe relative frequency of a particular one-locus genotype in a population79
6073761906Population GeneticsThe study of factors affecting gene and genotypic frequencies in a population80
6073761907FixationThe point at which a particular allele becomes the only allele at its locus in a population - the frequency of the allele becomes one81
6073761908Half SibsHalf brothers and sisters82
6073761909Common AncestorAn ancestor common to more than one individual. In the context of inbreeding, the term refers to an ancestor common to the parents of a inbred individual83
6073761910Arrow DiagramA form of pedigree depicting schematically the flow of genes from ancestors to descendants84
6073761911Pedigree RelationshipRelationship between animals due to kinship. Examples include full-sib, half-sib, and parent-offspring relationships85
6073761912OutbreedingThe mating of unrelated individuals86
6073761913Hardy-Weinberg EquilibriumA state of constant gene and genotypic frequencies occurring in a population in the absence of forces that change those frequencies87
6073761914F1Referring to the first generation crosses between two unrelated (though not necessarily purebred) populations88
6073761915F2Referring to the generation of crosses produced by mating F1 (first-cross) individuals among themselves89
6073761916MutationThe process that alters DNA to create new alleles90
6073761917MigrationThe movement of individuals into or out of a population91
6073761918Random DriftChange in gene frequencies in small populations due purely to chance92
6073761919Random MatingA mating system in which all matings are equally likely (absence of any systematic mating scheme )93
6073761920Qualitative/Categorical TraitA trait in which phenotypes are expressed in categories94
6073761921Quantitative TraitA trait in which phenotypes show continuous (numerical) expression95
6073761922DystociaDifficulty in giving birth or being born96
6073761923Threshold TraitA polygenic trait in which phenotypes are expressed in categories97
6073761924Test Mating/Test CrossA mating designed to reveal the genotype of an individual for a small # of loci98
6073761925Embryo Transfer (E.T.)A reproductive technology in which embryos from donor females are collected and transferred in fresh or frozen form to recipient females99
6073761926FitnessThe ability of an individual and its corresponding phenotype and genotype to contribute offspring to the next generation. The term refers to the number of offspring an individual produces--not just its ability to be selected100
6073761927Phenotypic ValueA measure of performance for a trait in an individual-- a performance record101
6073761928Population MeanThe average phenotypic value of all individuals in a population -- to show that the elements of the genetic model are relative to the population being considered102
6073761929Genotypic ValueThe effect of an individual's genes (singly and in combination) on its performance for a trait -- not directly measureable103
6073761930Independent Gene EffectThe effect of a gene independent of the effect of the other gene at the same locus (dominance) and the effects of genes at other loci (epistasis).104
6073761931Estimated Breeding ValueA prediction of a breeding value105
6073761932Progeny Difference or Transmitting AbilityHalf an individual's breeding value - the expected difference between the mean performance of the individual's progeny and the mean performance of all progeny (assuming randomly chosen mates) PD=1/2BV106
6073761933Expected Progeny Difference of Predicted Difference of Estimated Transmitting AbilityA prediction of a progeny difference107
6073761934Additive Gene EffectIndependent gene effect108
6073761935Additive Genetic Value or Additive ValueBreeding value109
6073761936Gene Combination ValueThe part of an individual's genotypic value that is due to the effects of gene combinations (dominance and epistasis) and cannot, therefore, be transmitted from parent to offspring110
6073761937Gen Combination EffectThe effect of a combination of genes, i.e., a dominance or epistatic effect111
6073761938Nonadditive Gene EffectsGene combination effects112
6073761939Nonadditive Genetic Value of Nonadditive ValueGene combination value113
6073761940Repeated traitA trait for which individuals commonly have more than one performance record (ex. milk production, wool production)114
6073761941Producing AbilityThe performance potential of an individual for a repeated trait, permanent115
6073761942Permanent Environmental EffectAn environmental effect that permanently influences an individual's performance for a repeated trait PA = BV + GCV + Ep116
6073761943Temporary Environmental EffectAn environmental effect that influences a single performance record of an individual, but does not permanently affect the individual's performance potential for a repeated trait117
6073761944Most Probably Producing AbilityA prediction of producing ability (more important for producers) P = (mu) + MPPA118
6073761945ThresholdA point on the continuous liability scale for a threshold trait above which animals exhibit one phenotype and below which they exhibit another (ex. fertility)119

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