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13079160998transformationA change in genotype and phenotype due to the assimilation of external DNA by a cell.0
13079160999bacteriophageA virus that infects bacteria; also called a phage.1
13079161000semiconservative modelType of DNA replication in which the replicated double helix consists of one old strand, derived from the old molecule, and one newly made strand.2
13079161001origins of replicationSite where the replication of a DNA molecule begins, consisting of a specific sequence of nucleotides.3
13079161002replication forkA Y-shaped region on a replicating DNA molecule where new strands are growing.4
13079161003DNA polymeraseAn enzyme that catalyzes the formation of the DNA molecule.5
13079161004lagging strandA discontinuously synthesized DNA strand that elongates by means of Okazaki fragments, each synthesized in a 5' to 3' direction away from the replication fork.6
13079161005leading strandThe new continuous complementary DNA strand synthesized along the template strand in the mandatory 5' to 3' direction.7
13079161006Okazaki fragmentsSmall fragments of DNA produced on the lagging strand during DNA replication, joined later by DNA ligase to form a complete strand.8
13079161007primaseAn enzyme that joins RNA nucleotides to make the primer using the parental DNA strand as a template.9
13079161008HelicaseAn enzyme that untwists the double helix at the replication forks, separating the two parental strands and making them available as template strands.10
13079161009topoisomeraseA protein that functions in DNA replication, helping to relieve strain in the double helix ahead of the replication fork.11
13079161010single-strand binding proteinBinds to and stabilizes single-stranded DNA until it can be used as a template12
13079161011nucleaseA DNA cutting enzyme that excises damaged DNA.13
13079161012telomeresRepeated DNA sequences at the ends of eukaryotic chromosomes.14
13079161013telomeraseAn enzyme that catalyzes the lengthening of telomeres in eukaryotic germ cells.15
13079161014Watson and CrickDeveloped the double helix model of DNA.16
13079161015Hersey-Chase ExperimentDevised an experiment that showed that only the DNA of T2 phages enters a bacterial cell during infection.17
13079161016Frederick GriffithDiscovered transformation during an experiment that involved injecting mice with smooth S cells, rough R cells, heat-killed S cells, and heat-killed S cells with living R cells.18
13079161017McCarty, Avery, & MacLeodConfirmed that the transforming agent in Griffith's experiment was DNA.19
13079161018one gene-one polypeptide hypothesisThe premise that a gene is a segment of DNA that codes for one polypeptide.20
13079161019transcriptionSynthesis of an mRNA molecule from a DNA template.21
13079161020messenger RNA (mRNA)Carries genetic message from the DNA to he protein-synthesizing machinery of the cell.22
13079161021Erwin ChargaffDiscovered that DNA composition varies, but the amount of adenine is always the same as thymine and the amount of cytosine is always the same as guanine.23
13079161022Meselson & StahlDetermined that DNA replication is semiconservative.24
13079161023translationThe synthesis of a polypeptide, which occurs under the direction of mRNA.25
13079161024ribosomesComplex particles that facilitate the orderly linking of amino acids into polypeptide chains.26
13079161025RNA processingThe modification of mRNA before it leaves the nucleus that is unique to eukaryotes.27
13079161026primary transcriptThe initial mRNA transcript that is transcribed from a protein coding gene. Also called pre-mRNA.28
13079161027triplet codeThree-nucleotide long set that specifies a specific amino acid for a polypeptide chain.29
13079161028template strandThe DNA strand that provides the template for ordering the sequence of nucleotides in an mRNA transcript.30
13079161029TATA boxA promoter DNA sequence crucial in forming the transcription initiation complex.31
13079161030promoterA specific nucleotide sequence in DNA that binds RNA polymerase and indicates where to start transcribing RNA.32
13079161031RNA polymeraseEnzyme that links together the growing chain of ribonucleotides during transcription.33
13079161032poly-A tailModified 3' end of an mRNA molecule consisting of the addition of some 50 to 250 adenine nucleotides.34
13079161033terminatorIn prokaryotes, a special sequence of nucleotides in DNA that marks the end of a gene.35
130791610345' capThe 5' end of a pre-mRNA molecule modified by the addition of a cap of guanine nucleotide.36
13079161035exonsCoding segments of eukaryotic DNA.37
13079161036anticodonSpecialized base triplet at one end of a tRNA molecule that recognizes a particular complementary codon on an mRNA molecule.38
13079161037frameshift mutationMutation occuring when the number of nucleotides inserted or deleted is not a multiple of three, resulting in improper grouping of nucleotides into codons.39
13079161038missense mutationMost common type of mutation, a base pair mutation in which the new codon makes sense in that it still codes for an amino acid.40
13079161039nonsense mutationA mutation that changes an amino acid codon to one of three stop codons, resulting in a shorter and usually nonfunctional protein.41
13079161040Gene Expressionprocess by which DNA directs synthesis of proteins42
13079161041Transcription-synthesis of RNA under direction of DNA -DNA serves as template for assembling complementary RNA molecule -resulting RNA molecule faithful transcript of gene's protein-building instructions -occurs in nucleus43
13079161042Messenger RNA (mRNA)RNA molecule that carries genetic message from DNA to protein synthesizing machinery of cell44
13079161043Translation-synthesis of polypeptide -occurs under direction of mRNA -change in language-cell must translate base sequence of mRnA molecule into amino acid sequence of polypeptide -occurs in cytoplasm45
13079161044Ribosomes-sites of translation -complex particles that facilitate orderly linking of amino acids into polypeptide chains46
13079161045Primary Transcriptinitial RNA transcript from any gene, including those coding for RNA that is not translated into protein47
13079161046Triplet Codegenetic instructions for polypeptide chain written in DNA as series of non-overlapping, 3 nucleotide words48
13079161047Template StrandDNA strand that provides pattern/template for sequence of nucleotides in RNA transcript49
13079161048CodonsmRNA base triplets written 5'-3' direction50
13079161049Reading Framegrapings w/ symbols w/ message that needs to be translated to written language51
13079161050RNA Polymerase-pries 2 strands of DNA apart -joins RNA nucleotides as they base pair along DNA template -assemble polynucleotides 5' -> 3' -can start chain from scratch-no primer needed52
13079161051PromoterDNA sequence where RNA polymerase attaches and initiates transcription53
13079161052Terminatorsequence that signals end of transcription in bacteria54
13079161053Transcription Unitstretch of DNA transcribed into RNA molecule55
13079161054Transcription Factorsproteins that mediate binding of RNA polymerase and initiation of transcription56
13079161055Transcription Initiation Complexcomplex of transcription factors and RNA polymerase II bound to promoter57
13079161056TATA Boxcrucial promoter DNA sequence58
13079161057RNA Processingenzymes in eukaryotic nucleus modify pre-mRNA in specific ways before genetic messages dispatched to cytoplasm59
130791610585' Capmodified form of guanine added onto 5' end after transcription 1. facilitates export of mature mRNA from nucleus 2. helps protect mRNA from degradation by hydrolytic enzymes 3. helps ribosomes attach to 5' end of mRNA once mRNA reaches cytoplasm60
13079161059poly-A Tail-50-250 more A nucleotides added to 3' end by enzyme 1. facilitates export of mature mRNA from nucleus 2. helps protect mRNA from degradation by hydrolytic enzymes 3. helps ribosomes attach to 5' end of mRNA once mRNA reaches cytoplasm61
13079161060RNA splicingremoval of large portions of RNA molecule initially synthesized62
13079161061Intronsnoncoding segments of nucleic acid that lie between coding regions63
13079161062Exonsnucleotide regions that are expressed, usually translated into amino acid sequences64
13079161063Spliceosomeinteracts w/ certain sites along introns, releasing intron and joining together 2 exons that flanked intron65
13079161064RibozymesRNA molecules that function as enzymes, can b/c: 1. RNA single stranded, region of RNA molecule may base-pair w/ complementary region elsewhere in same molecule-gives molecule particular 3D structure-essential to catalytic function of ribozymes, just like in enzymatic proteins 2. some RNA bases have functional groups that may participate in catalysis 3. ability of RNA to hydrogen bond w/ other nucleic acid molecules-adds specificity to catalytic activity66
13079161065Alternative RNA Splicingmany genes can give rise to 2+ polypeptides, depending on which segments are treated as exons during RNA processing -# different protein products > # genes67
13079161066Domainsfunctional regions part of protein architecture68
13079161067Transfer RNA (tRNA)transfer amino acids from cytoplasmic pool of AA to ribosome69
13079161068Anticodonnucleotide triplet that base pairs of complementary codon of mRNA70
13079161069Aminoacyl tRNA Synthetases-able to bind to different tRNAs that code for specific amino acid -catalyzes covalent attachment to tRNA -> aminoacyl tRNA released from enzyme -available to deliver AA to growing polypeptide chain of ribosome71
13079161070Wobbleflexible base pairing at codon position72
13079161071Ribosomal RNA (rRNA)made in nucleolus, make up ribosomal subunits73
13079161072P Site (peptidyl-tRNA site)holds tRNA carrying growing polypeptide chain74
13079161073A Site (aminoacyl-tRNA site)holds tRNA carrying next AA to be added in chain75
13079161074E Site (exit site)where discharged tRNAs leave ribosome76
13079161075Release Factorprotein that binds to stop codon @ A site77
13079161076Polyribosomes-strings of ribosomes trailing along mRNA -enables cells to make many copies of polypeptide quickly78
13079161077Signal Peptide-targets protein to ER -marks if polypeptide of proteins destined for endomembrane system or for secretion79
13079161078Signal Recognition Particle (SRP)brings ribosome to receptor protein into ER membrane80
13079161079Signal Mechanism for Targeting Proteins to ER1. polypeptide synthesis begins on free ribosome in cytosol 2. SRP binds to signal peptide, halting synthesis momentarily 3. SRP binds to receptor proteins in ER membrane (receptor is part of protein complex w/ membrane and signal cleaving enzyme) 4. SRP leaves, and polypeptide synthesis resumes w/ simultaneous translocation across membrane (signal peptide stays attached to translocation complex) 5. signal cleaving enzyme cuts off signal peptide 6. rest of complexed polypeptide leaves ribosome and folds into final conformation81
13079161080Mutations-change into genetic information of cell -responsible for huge diversity of genes found along organisms82
13079161081Point Mutations-chemical changes in a single base pair of a gene -if occurs in a gamete, can be transmitted to offspring and future generations83
13079161082Base Pair Substitutionsreplacement of one nucleotide and its partner w/ another pair of nucleotides84
13079161083Missense Mutations-change one amino acid to another -new amino acid may have properties similar to replaced amino acid, or may be in region where exact sequence of amino acids not essential to proteins functions85
13079161084Nonsense Mutation-change codon for amino acid into stop codon -causes translation to be terminated prematurely -resulting polypeptide shorter than polypeptide encoded by normal gene86
13079161085Insertionsadditions of nucleotide pairs in gene87
13079161086Deletionlosses of nucleotide pairs in gene88
13079161087Frameshift Mutations-# nucleotides inserted/deleted NOT multiple of 3 -may alter reading frame of genetic message89
13079161088Mutagenphysical and chemical agents that interact w/ DNA that cause mutations90
13079161089rRNAmakes up 60% of the ribosome; site of protein synthesis91
13079161090geneequals one RNA molecule92
13079161091snRNAsmall nuclear RNA93
13079161092srpRNAsignal recognition particle that binds to signal peptides94
13079161093RNAiInterference RNA95
13079161094ribozymeRNA molecule that functions as an enzyme96
13079161095Operator-off/on "switch" that controls whole cluster of functionally related genes97
13079161096Operon-operate + promoter + genes they control -entire stretch of DNA for enzyme production for tryptophan pathway98
13079161097Repressor-protein that switches operon off99
13079161098Regulatory Gene (trpR)-product of trp repressor100
13079161099Corepressorsmall molecule that cooperates w/ repressor protein to switch operon off101
13079161100Repressible Operontranscription usually on but can be inhibited when specific small molecule binds allosterically to regulatory protein102
13079161101Inducible Operontranscription usually off but can be stimulated when specific small molecule interacts w/ regulatory protein103
13079161102Inducerspecific small molecule, inactivates repressor104
13079161103Activatorprotein that binds to DNA and stimulates gene transcription (ex. CAP)105
13079161104Differential Gene Expressionexpression of different genes by cells in the same genome106
13079161105Histone Acetylation-attached to lysines in histone tails -> lysines acetylated -> positive charges neutralized -histone tails no longer bind to neighboring nucleosomes107
13079161106Control Elementssegments of noncoding DNA that help regulate transcription by binding certain proteins108
13079161107Enhancers-distal control elements -may be thousands of nucleotides upstream/downstream of gene or in intron109
13079161108Alternative RNA Splicing-different mRNA molecules produced from same primary transcript, depending on which RNA segments are treated as introns and exons -can expand repertoire of eukaryotic genome110
13079161109Proteasomegiant protein complex recognize ubiquitin-tagged proteins and degradation111
13079161110microRNAs (miRNAs)-small, single-stranded RNA molecules capable of binding to complementary sequences in mRNA molecules112
13079161111RNA interference (RNAi)injecting double-stranded RNA molecules into cell turned off expression of gene w/ same sequence as RNA113
13079161112Small Interfering RNAs (siRNAs)-similar in size and function to miRNAs -formed by much longer double-stranded RnA molecules -> many siRNAs114
13079161113Cell Differentiationprocess by which cells become specialized in structure and function115
13079161114Morphogenesisphysical processes that give organism its shape116
13079161115Cytoplasmic Determinantsmaternal substances in egg that influence course of early development117
13079161116Inductionchanges in target cells caused by signals impinging on embryonic cell from others in vicinity, including contact w/ cell surface molecules on neighboring cells and binding of growth factors secreted by neighboring cells118
13079161117Determination-events that lead to observable differentiation of cell119
13079161118Homoeotic Genescontrol pattern formation in late embryo, larva, and adult120
13079161119Bicoid (two-tailed)-mutant gene causes lack of front half of body and posterior structure at both ends -essential for setting anterior end121
13079161120Morphagengradients for substances that establish embryos axis and more122
13079161121Oncogenes-cancer-causing genes123
13079161122Proto-Oncogenes-normal versions of cellular genes -code for proteins that stimulate normal cell growth and division124
13079161123Tumor-Supressor Genes-prevent uncontrolled cell growth -repair damaged DNA -control cell anchorage (absent in cancers)125
13079161124Ras ProteinG protein that relays signal from growth factor on plasma membrane126
13079161125p53tumor suppressor gene that codes for specific transcription factor protein that promotes synthesis of cell cycle127
13079161126Mutation Effects-result in cell cycle overstimulated -not inhibited normally128
13079161127VirusA small, non living, infectious particle- not capable of of essential life functions to maintain life, health, and continuation of species like other organisms.129
13079161128Viral genomesConsist of either RNA or DNA ( DNA virus or RNA virus)130
13079161129DNA virusesThe viruses that have DNA genomes.131
13079161130RNA virusesViruses that have RNA genomes.132
13079161131Living host cell's genomeRequired in viruses in order for them to replicate and carry out protein synthesis.133
13079161132CapsidsA protein shell that encloses a wild genome.134
13079161133CapsomeresProtein subunits that make up capsids.135
13079161134Membranous envelope (lipid bilayer)Sometimes surrounds a capsid- comes from the host cells membrane as the capsid exits.136
13079161135Viral glycoproteinsAllow viruses to bind to receptor proteins on host cells.137
13079161136Adenovirus- Contain glycoproteins - Ex. Common cold ...138
13079161137Influenza virus- Contain glycoproteins - Ex. The flu ...139
13079161138bacteriophages (phages)- Viruses that infect bacteria only!!! - Do not contain glycoproteins - Have the most complex capsids in viruses140
13079161139Elongated capsid headEnclosed a bacteriophage's genetic material141
13079161140Protein tail piece- Attaches the phage to a host by binding to a receptor - Allows a virus to inject its genetic material into a bacterium142
13079161141Obligate intercellular parasitesTheses only replicate using a host143
13079161142Host rangeThe limited number of species host cells a virus can infect — — differs per type of virus144
13079161143General replication cycle1. Viral genetic material enters the host cell 2. A virus uses the host cell's replication machinery (enzymes, ribosomes, tRNA, ATP, etc.) 3. Genes then product the proteins they code for 4. Viral nucleic acids and capsid proteins spontaneously self-assemble into new viruses145
13079161144Lytic cycle- The reproduction of viruses immediately followed by the lysing of the host cell and release of new phages - culminates in the death of the bacterium immediately after new viruses are made - newly made viruses are released to infect other bacteria and repeat the cycle146
13079161145Virulent phageA phage that reproduces only by the lytic cycle147
13079161146Restriction enzymesRecognize and cut up DNA before replication148
13079161147Lysogenic cycle1. A virus incorporates its genetic material into the host genome and then remains dominant 2. With each host cell division, the viral genetic material is passed onto daughter cells 3. A later event causes the expression of the viral genome producing new phages followed by the lysis of a host cell149
13079161148Prophage- A phage genome inserted and integrated into the circular bacterial DNA chromosome - It is present without causing disruption in the cell150
13079161149Environmental signalTriggers the viral genome in the lysogenic cycle to switch to 'lytic mode'151
13079161150Temperate phagesPhages that use the lysogenic cycle to reproduce152
13079161151Variables to classify virus that infect animals- DNA or RNA - Single-stranded or double-stranded genetic material153
13079161152ssRNACan serve as mRNA, a template for mRNA synthesis, or a template for DNA synthesis154
13079161153RetrovirusA virus that stores its nucleic acid as RNA (ssRNA)155
13079161154Reverse transcriptase enzymeUsed ince a retrovirus is inside the host cell in order to produce DNA from its RNA156
13079161155ProvirusWhen the dsDNA of a virus that infects animals is incorporated into the hosts' genome, the retroviral DNA is referred to as this157
13079161156HIV (human immunodeficiency virus)- A retrovirus that causes AIDS - An infectious pathogen the destroys the human immune system -There is not cure for this virus yet158
13079161157️AIDS ( acquired immunodeficiency syndrome)The final stage of the immune system after being effected by HIV, when all of the T4 lymphocytes have lysed159
13079161158T4 lymphocytesThe host cells of the HIV virus; they're WBC (white blood cells) which have a major role in the immune system - HIV replicated and then lyses these cells, thus spreading itself through them160
13079161159ARVsA method that may slow the disease of AIDS and its process, as well as its secondary diseases and complications161
13079161160Antiretroviral medicationsA medication used to treat viruses, but cannot treat HIV162
13079161161AIDS related cancersCervical cancer, Kaposi sarcoma, and lymphoma; it is common for people with AIDS to die from these163
13079161162Free nucleic acidsthe material in which viruses most likely evolved from since they only replicate using host cells164
13079161163Plasmids- A piece of small, circular DNA found in bacteria - Separate from and can replicate independently of the chromosomal DNA - Can be passed from one bacterium to another in cell division165
13079161164Transposon/ Transposable element (TE)/ Jumping genesDNA sequences that move from one location in the genome to another166
13079161165VectorA bacteriophage that transfers genetic material from one cell to another167
13079161166DNA technologymethods used to study and/or manipulate DNA, including recombinant DNA technology168
13079161167biotechnologya form of technology that uses living organisms, usually genes, to modify products, to make or modify plants and animals, or to develop other microorganisms for specific purposes169
13079161168nucleic acid hybridizationthe base pairing of one strand of a nucleic acid to a complementary sequence on another strand170
13079161169genetic engineeringprocess of making changes in the DNA code of living organisms171
13079161170DNA sequencingthe process of determining the precise order of nucleotides within a DNA molecule172
13079161171DNA cloningthe production of multiple copies of a specific DNA segment173
13079161172plasmida small, circular piece of DNA located in the cytoplasm of many bacteria174
13079161173recombinant DNA moleculea DNA molecule made in vitro with segments from different sources175
13079161174gene cloningthe production of multiple copies of a single gene176
13079161175cloning vectora DNA molecule that can carry foreign DNA into a host cell and replicate there177
13079161176restriction enzymean enzyme that cuts DNA at a specific sequence of nucleotides178
13079161177restriction sitea specific sequence on a DNA strand that is recognized as a cut siteby a restriction enzyme179
13079161178restriction fragmentthe fragment of DNA that is produced by cleaving DNA with a restriction enzyme180
13079161179sticky enda single-stranded end of a double-stranded DNA restriction fragment181
13079161180gel electrophoresisprocedure used to separate and analyze DNA fragments by placing a mixture of DNA fragments at one end of a porous gel and applying an electrical voltage to the gel182
13079161181polymerase chain reaction (PCR)a technique for amplifying DNA in vitro by incubating with special primers, DNA polymerase molecules, and nucleotides183
13079161182expression vectora cloning vector that contains a highly active bacterial promoter just upstream of a restriction site where the eukaryotic gene can be inserted in the correct reading frame184
13079161183electroporationa technique to introduce recombinant DNA into cells by applying a brief electrical pulse to a solution containing the cells. The pulse creates temporary holes in the cells' plasma membrane, through which DNA can enter185
13079161184nucleic acid proberadioactively labeled nucleic acid molecule used to tag a particular DNA sequence186
13079161185in situ hybridizationa technique using nucleic acid hybridization with a labeled probe to detect the location of a specific mRNA in an intact organism187
13079161186reverse transcriptase polymerase chain reaction (RT-PCR)a variant of polymerase chain reaction, that commonly used in molecular biology to detect RNA expression188
13079161187complementary DNA (cDNA)DNA molecule made in vitro using mRNA as a template and the enzyme reverse transcriptase189
13079161188DNA microarray assaya method to detect and measure the expression of thousands of genes at one time190
13079161189RNA sequencing (RNA-seq)a method of analyzing large sets of RNAs that involves making cDNAs and sequencing them191
13079161190in vitro mutagenesisa technique to discover the function of a gene by introducing specific changes into the sequence of a cloned gene, reinserting the mutated gene into a cell, and studying the phenotype of the mutant192
13079161191CRISPR-Cas9 systema technique for editing genes in living cells, involving a bacterial protein called Cas9 associated with a guide RNA complementary to a gene sequence of interest193
13079161192genome-wide association studya large-scale analysis of the genomes of many people having a certain phenotype or disease, with the aim of finding genetic markers that correlate with that phenotype or disease194
13079161193single nucleotide polymorphism (SNP)a single base-pair site in a genome where nucleotide variation is found in at least 1% of the population195
13079161194stem cellunspecialized cell that can give rise to one or more types of specialized cells196
13079161195totipotentstem cells with the potential to differentiate into any type of cell197
13079161196pluripotentcells that are capable of developing into most, but not all, of the body's cell types198
13079161197gene therapythe insertion of working copies of a gene into the cells of a person with a genetic disorder in an attempt to correct the disorder199
13079161198transgenicterm used to refer to an organism that contains genes from other organisms200
13079161199genetic profilean individual's unique set of genetic markers201
13079161200short tandem repeats (STRs)sections of a chromosome in which DNA sequences are repeated202
13079161201genetically modified organism (GMO)an organism produced by copying genes from a species with a desirable trait and inserting them into another species203

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