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AP Biology - All Terms! Flashcards

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9928771191Covalent Bondsoccurs when valence electrons are shared by two atoms0
9928771192Nonpolar covalent bondsoccurs when the electrons being shared are shared equally between the two atoms1
9928771193Polar covalent bondsone atom has greater electronegativity than the other, resulting in an unequal sharing of the electrons (In h20 - O is slightly negative and H is slightly positive)2
9928771194Ionic Bondstwo atoms attract valence electrons so unequally that the more electronegative atom steals the electron away from the less electronegative atom3
9928771195Ionresulting charged atom or molecule from an ionic bond4
9928771196Hydrogen bondweak bonds that for between partial positively charged H atom of one molecule and the strongly electronegatively charged O or N atom of another molecule5
9928771197Van der Waals Interactionsvery weak connections that are the result of the asymmetrical distribution of electrons within a molecule. they contribute to the 3D shape of molecules6
9928771198Properties of Water- One O- and two H+ atoms - Water molecules are polar - Hydrogen bonds form between H20 molecules - maximum of 4 H bonds at a time per water molecule7
9928771199Cohesionthe linking of molecules (ex: bugs can walk on water due to this property)8
9928771200Adhesionclinging of one substance to another (ex: water droplets adhering to glass windshield)9
9928771201Specific Heatthe amount of heat required to change the temperature of a substance 1 degree celsius. (ex: high specific heat makes the temp. of our oceans stable and able to support plant/animal life)10
9928771202Hydrophilicwater-soluble sustances (ex: sugars, ioinic compounds, some proteins, etc)11
9928771203Hydrophobicnonpolar substances (ex: oil) that do not dissolve in water12
9928771204pH scaleacidic/basic conditions affect living organisims13
9928771205Major elements of lifeC, H, O, N, S, and P14
9928771206Isomersmolecules that have the same molecular formula but differ in their arrangement of these atoms. (ex: glucose and fructose have same omolecular formula but different roles)15
9928771207Hydroxyl (-OH) Functional Group- ex: ethanol, methanol - helps dissolve sugars16
9928771208Carboxyl (-COOH) Functional Group- C double bonded to O and has bond to OH - ex: fatty acids, sugars17
9928771209Carbonyl (- C double bonded to O - ex: ketones and aldehydes such as sugars18
9928771210Amino (-NH2) Functional Group- ex: amino acids19
9928771211Phosphate (PO3) Functional Group- ex: organic phosphate, including ATP, DNA, and phospholipids20
9928771212Sulfhydryl (-SH) Functional Group- ex: some amino acids, forms disulfide bridges in proteins21
9928771213Methyl (-CH3)- ex: addition of a methyl group affects the expression of genes22
9928771214Polymerslong chain molecules made of repeating subunits called monomers (ex: starch is a polymer composed of glucose monomers)23
9928771215Dehydration reactions/synthesiscreat polymers from monomers. Two monomers are joined by removing one molecule of water24
9928771216Hydrolysisoccurs when water is added to split large molecules25
9928771217Carbsincludes simple sugars (glucose, fructose, etc.) and polymers such as starch.26
9928771218Monosaccharidesmonomers of carbohydrates (ex: glucose and ribose)27
9928771219Polysaccharidespolymers of monosaccharides (ex: starch[plants], cellulose, glycogen [animals])28
9928771220Lipids- all hydrophobic. they are not polymers because they are assembled from a variety of components (ex: waxes, oils, fats, steriods)29
9928771221Fats (triglycerides)- made up of glycerol molecule and three fatty acid molecules30
9928771222Fatty Acidsnonpolar, hydrocarbon chains that are hydrophobic31
9928771223Saturated Fatty Acids- have no double bond between carbons - are solid at room temp - ex: butter, lard32
9928771224Unsaturated Fatty Acids- have double bond between carbons that results in kink - liquid at room temp - ex: corn oil and olive oil33
9928771225Phospholipids- make up cell membrane - have hydrophilic (polar) head - two fatty acids tails which are hydrophobic34
9928771226Steroids- made up of 4 rings fused together - ex: cholesterol is a steriod. it is a common component of cell membranes - estrogen and testosterone are steroid hormones35
9928771227Proteinspolymers made up of amino acids monomers36
9928771228Amino Acids- central carbon bonded to carboxyl group (COOH) - an amino group (NH2) - an H atom - and an R group37
9928771229Peptide BondsLink amino acids. Formed by dehydration synthesis between amino and carboxyl groups of adjacent monomers38
99287712304 Levels of Protein Structure- Primary - Secondary - Tertiary - Quaternary39
9928771231Primary Structurethe unique sequence in which amino acids are joined40
9928771232Secondary Structureeither the alpha helix (coiled, slinky shape) or beta pleated sheet (accordion shape) 3D shape. this is the result from H bonds between polypeptide backbone41
9928771233Tertiary Structureresults in complex shape due to interactions between R groups42
9928771234Quaternary Structureassociation of two or more polypeptide chains into one large protein43
9928771235Denaturationwhen a protein loses its shape and ability to function due to heat, a change in pH, etc.44
9928771236Nucleotides- Nitrogenous base (A, T, C, G in DNA - A, U, C, G in RNA) - Pentose (5 carbon) sugar - Phosphate group45
9928771237Plasma Membraneboundary for cell - selectively permeable46
99287712383 things about eukaryotic cells1) membrane-enclosed nucleus contains chromosomes 2) membrane-bound organelle in cytoplasm 3) euk. much bigger than prok.47
9928771239Nuclear envelopedouble membrane surrounding nucleus48
9928771240Nucleolusregion in nucleus where rRNA complexes with proteins to form ribosomal subunits49
9928771241Endoplasmic Reticulumnetwork of membranes and sacs that takes up more than half of membrane structure50
9928771242Smooth E.R.-synthesis of lipids -metabolism of carbs. -detoxification of drugs and poisons51
9928771243Rough E.R.-ribosomes on surface -synthesize proteins -proteins move from rough E.R. to golgi52
9928771244Golgi Apparatus(postal system analogy) proteins are modified, stored, shipped53
9928771245Lysosomessacs of enzymes that can digest molecules54
9928771246Vacuolesstore food/water for protists55
9928771247Central Vacuolein plant cell, store water56
9928771248Mitochondria-site of cellular respiration -found in both plant and animal cells57
9928771249Chloroplaststhe site of photosynthesis in plants58
9928771250Cytoskeletonnetwork of protien fibers through cytoplasm for support, mobility, and regulation59
9928771251Centrosomesregion near nucleus where microtubules grow60
9928771252Centrioleslocated within centrosomes61
9928771253Flagellahelp to propel through water (ex: sperm)62
9928771254Isotonic Solutionno net movement of water63
9928771255Hypertonic Solutioncell will lose water to its surroundings, may shrivel and die (more solute in water than in cell) ex: cell and ocean water64
9928771256Hypotonic Solutionwater enters cell faster than it leaves, cell may swell and burst (ex: cell and distilled water)65
9928771257Facilitated Diffusionthe process by which ions and hydrophilic solutions diffuse across the cell membrane with the help of proteins (dont need ATP)66
9928771258Active Diffusionsubstances move against concentration gradient (from less concentrated to more concentrated) this required atp (ex: NA-K pump)67
9928771259Endocytosiscell forms new vesicles from plasma membrane to take in molecules (ex: white blood cells engulfing foreign particles)68
9928771260ExocytosisVesicles from interior fuse with cell membrane to expel contents inside cell69
99287712613 stages of cell communication1) Reception 2) Transduction 3) Responce70
9928771262Apoptosiscontrolled cell suicide to protect neighboring cells from damage that could occur71
9928771263Somatic Cellany human cell that is not a sex cell (46 chromosomes)72
9928771264Gametesex cells like sperm and egg (haploid - 23 chromosomes)73
9928771265Interphase (mitosis)1) G1 Phase - growth, checkpoint (if bad --> G0) 2) S Phase - duplicated chromosomes 3) G2 Phase - growth, checkpoint74
9928771266Mitosis Prophase1) chromatin becomes chromatids 2) nucleoli disappears 3) mitotic spindle begins to form75
9928771267Mitosis Prometaphase1) nuclear envelope fragments 2) chromatids held to each other by centromere76
9928771268Mitosis Metaphase1) chroms. move to metaphase plate at equator 2) centrioles are at opposite poles77
9928771269Mitosis Anaphase1) chromosomes separate 2) cell elongates 3) by the end, opposite ends of cell contain complete sets of chroms.78
9928771270Mitosis Telophase1) nuclear envelope reforms 2) cytokinesis begins (in animals, cleavage furrow forms - in plants, cell plate forms)79
9928771271Binary Fissionhow prokaryotes (bacteria) replicate their genome rather than mitosis80
9928771272Major cell checkpointsg1, g2, m phase checkpoints81
9928771273Kinasesprotein enzymes that control the cell cycle but only active when theyre connected to cyclin proteins (cdks)82
9928771274Transformationprocess that converts a normal cell to a cancer cell83
9928771275Metastasisoccurs when cells separate from tumor and enter blood/lymph vessels and travel around body84
9928771276Catabolic pathwayrelease of energy by the breakdown of compounds (ex: occurs when digestive enzymes break down food and release energy)85
9928771277Anabolic pathwayconsume energy to build molecules (ex: occurs when amino acids are linked to form muscle protein during exercise)86
9928771278energythe capacity to do work87
9928771279thermodynamicsstudy of energy transformations that occur in matter88
9928771280△Gsymbol for change in free energy89
9928771281exergonic reactionenergy is released90
9928771282endergonic reactionrequires energy91
9928771283energy couplingthe use of an exergonic process to drive an endergonic one92
9928771284ATP (adenosine triphosphate)nitrogenous base (adenine) ribose chain of three phosphate groups93
9928771285ADP (adenosine diphosphate)when atp transfers one phosphate group through hydrolysis it becomes adp94
9928771286catalystssubstances that can change the rate of a reaction without being altered95
9928771287active sitethe part of the enzyme that binds to the substrate96
9928771288fermentationpartial degradation of sugars that occur without use of O297
9928771289aerobic respirationmost efficient catabolic pathway - O2 is consumed as a reactant98
9928771290Cellular Respiration EQC6H12O6 + 6O2 ⥤ 6CO2 + 6H20 + energy99
9928771291oxidationwhen a reactant loses one or more electrons and energy100
9928771292reductionwhen a reactant gains one or more electrons and energy101
9928771293Glycolysis- occurs in cytosol - glucose (6C) is broken down into two pyruvate molecules (3C) - produces: 2 ATP and 2 NADH102
9928771294Cellular Respiration 4 stages1) Glycolysis 2) Pyruvate Oxidation 3) Krebs Cycle 4) Electron Transport Chain103
9928771295Pyruvate Oxidation- pyruvate oxidized to acetyl CoA - this releases CO2 - this is a branching point - if cell doesn't have O2 then fermentation occurs, if cell does then krebs cycle occurs104
9928771296Krebs Cycle (aka Citric Acid Cycle)- in mitochondrial matrix - releases CO2 as waste - glucose is broken down - step-wise catabolism of 6C citrate molecules - cycle happens twice for each glucose molecule - produces: 2 ATP, 6 NADH, 4 CO2, 2 FADH2105
9928771297Chemiosmosis- energy-coupling mechanism that stores energy as an H+ gradient to drive cellular work - electron transport chain and chemiosmosis make up oxidative phosphorylation106
9928771298Anaerobic Respirationused by prokaryotes to generate ATP without O2 using electron transport chain107
9928771299Fermentationexpansion of glycolysis where atp is generated by substrate-level phosphorylation108
9928771300Alcoholic Fermentationpyruvate converted to ethanol, releasing CO2 and oxidizing NADH in the process to make more NAD+109
9928771301Lactic Acid Fermentationpyruvate is reduced by NADH and lactate is formed as a waste product110
9928771302Stroma/Thylakoid/Chlorophyll/Granum- Chloroplast is overall structure - Strome is space inside - Thylakoids are the connected sacs - Granum is a stack of thylakoids - Chlorophyll is located in the thylakoid membranes111
9928771303Stomatatiny pores in leaf for CO2 to leave and O2 and H20 leave112
9928771304Photosynthesis6CO2 + 6H20 + light ⥤ C6H12O6 + 6O2113
9928771305Photosynthesis 2 Stages1) light reactions 2) Calvin cycle114
9928771306Light Reactions- light-dependent reaction - convert solar energy to chemical energy - ATP and NADPH - electron transport chain - protein H+ gradient across inner membrane (PS I and PS II) - in thylakoid - H20 goes in and 02 comes out115
9928771307Calvin Cycle- light-independent reactions - in stroma - carbon enters as CO2 and leaves as sugar116
9928771308Steps of Calvin Cycle1) CO2 attaches to RuBP (5C molecule - enzyme rubisco catalyzes reaction) 2) this 6C unstable molecule breaks into PGA 3) ATP phosphorylates PGA, PGA is reduced by NADPH and forms G3P 4) 2 molcules of G3P bond to become one molecule of glucose 5) remaining G3P molecules are phosphorylated by ATP and are regenerated into RuBP117
9928771309Leading strand from ___ to ___5' - 3'118
9928771310Lagging strand from ___ to ___3' - 5'119
9928771311DNA Ligaseseals Okazaki fragments120
9928771312Transcriptionthe synthesis of RNA using DNA as a template121
9928771313Messenger RNA (mRNA)carries genetic material to ribosome122
9928771314Translationthe production of a polypeptide chain using the mRNA transcripts (occurs in ribosome)123
9928771315RNA polymeraseenzyme that separates the 2 DNA strands and connects the RNA nucleotides along the the DNA template strand124
9928771316CodonsmRNA base triplets125
9928771317Promoterthe DNA sequence where the RNA polymerase attaches126
9928771318Terminatorthe DNA sequence that signals the end of transcription127
9928771319Stages of Transcription1) Initiation 2) Elongation 3) Termination128
99287713205' cap and poly-A-tailhelp mRNA leave nucleus, protects mRNA from degredation, facilitate attachments of mRNA to ribosome129
9928771321IntronsPart of mRNA that are spliced out through RNA splicing130
9928771322Exonsthe sections that remain after RNA splicing131
9928771323Anticodoncodon on tRNA that binds with mRNA132
9928771324tRNAtransfers amino acids from a pool of amino acids in cytoplasm to ribosome133
9928771325point mutationalteration of just one base pair134
9928771326missense mutationamino acid the codon codes for is still the same135
9928771327nonsense mutationamino acid changes to code for a stop codon136
99287713283 parts of operon1) operator to control access of RNA 2) promoter where RNA polymerase attaches 3) genes of operon137
9928771329restriction enzymesused to cut strands of DNA at specific locations (restriction sites)138
9928771330Meiosis Interphasechromosomes duplicate, replicating their DNA. centrosome also divides139
9928771331Meiosis I Prophase-chromosomes condense, resulting in 2 sister chromatids attached at their centromeres -crossing over (synapsis) occurs (now have tetrads and chismatas) -spindle poles move away from each other, nuclear envelope goes away, spindle microtubules attach to kinetochores on chroms.140
9928771332Meiosis I Metaphase-lined up at metaphase plate141
9928771333Meiosis I Anaphase-spindle apparatus helps to move chroms to opposite ends of cell -sister chroms stay connected, homologous chroms separate142
9928771334Meiosis I Telophase and Cytokinesis-each pole has haploid set of chroms, each chrom consisting of 2 sister chromatids -cleavage furrow forms in animals, cell plates in plant cells -daughter cells are now haploid143
9928771335Meiosis II Prophase-spindle apparatus forms -sister chroms move toward metaphase plate144
9928771336Meiosis II Metaphase-haploid number of chroms. is now arrayed on metaphase plate -kinetochores of each sister chromatid are attached to microtubules from opposite poles145
9928771337Meiosis II Anaphase-centromeres of sister chromatids separate and individual chroms move to opposite ends146
9928771338Meiosis II Telophase and Cytokinesis-nuclei reappear -each 4 daughter cells has haploid number of chroms147
9928771339Meiosis vs Mitosis-synapsis doesn't occur during mitosis -tetrads at metaphase plate rather than individual chroms like in mitosis -in miosis duplicated homo. chroms separate but sister chroms. stay attached. in mitosis, the chromatids separate148
9928771340Complete dominancewhen the heterozygote and homosygote for the dominant allele are the same ex: Yy and YY are both equally yellow149
9928771341Codominanceoccurs when 2 alleles are dominant and affect the phenotype in two different, equal ways ex: blood types - A and B are dominant to O but A and B are codominant to each other150
9928771342Incomplete Dominancewhere Fi hybrids have an appearance in between that of 2 parents ex: red flower and white flower breed and make pink151
9928771343Polyploidyhaving more that two complete sets of chroms. (rare in animals, frequent in plants)152
9928771344Chromosome Deletionwhen chrom. fragment is lost (missing genes)153
9928771345Chromosome Duplicaitonwhen chrom. segment is repeated154
9928771346Chromosome Inversionwhen chrom. fragment breaks off and reattaches backward155
9928771347Chromosome Translocationwhen chrom. fragments breaks off and reattaches on a nonhomologous chrom.156
9928771348p + q = 1p= frequency of dominant alleles in pop. q= frequency of recessive alleles in pop.157
9928771349p^2+2pq+q^2=1p^2= frequency of homo. dominant individuals q^2= frequency of homo. recessive individuals 2pq= frequency of heterozygous individuals158
9928771350antibodya blood protein produced in response to antigen159
9928771351antigena toxin or other foreign substance that induces an immune response in the body160
9928771352b-cella lymphocyte responsible for producing antibodies161
9928771353cell-mediated immunityan immune response that does not involve antibodies, but involves the activation of phagocytes, cytotoxic T-lymphocytes, and cytokines in response to an antigen162
9928771354cell communicationthe process by which a cell detects and responds to signals in its environment163
9928771355cyclic AMP (cAMP)lays a major role in controlling many enzyme-catalyzed processes164
9928771356cytotoxic t-cell (killer t-cells)is a T lymphocyte (a type of white blood cell) that kills cancer cells, cells that are infected (particularly with viruses), or cells that damaged in other ways165
9928771357g-protein linked receptordetect molecules outside the cell and activate internal signal166
9928771358helper t-cella T cell that influences or controls the differentiation or activity of other cells of the immune system167
9928771359hormonea regulatory substance produced in an organism (transported in tissue fluids such as blood) to stimulate specific cells into action168
9928771360humoral immunityaspect of immunity that is mediated by macromolecules found in extracellular fluids (body fluids) such as secreted antibodies, complement proteins, and certain antimicrobial peptides169
9928771361inducera molecule that regulates gene expression. An inducer can bind to protein repressors or activators. Inducers function by disabling repressors. The gene is expressed because an inducer binds to the repressor170
9928771362lytic cycleone of the two cycles of viral reproduction, the other being the lysogenic cycle. The lytic cycle results in the destruction of the infected cell and its membrane.171
9928771363operona segment of DNA to which a transcription factor binds to regulate gene expression by repressing it. Repressors bind to operators to prevent transcription172
9928771364phagocytecells that protect the body by ingesting (phagocytosing) harmful foreign invaders173
9928771365phosphorylation cascadea sequence of events where one enzyme phosphorylates another, causing a chain reaction leading to the phosphorylation of thousands of proteins174
9928771366protein kinasea kinase enzyme that modifies other proteins by chemically adding phosphate groups to them (phosphorylation)175
9928771367receptorA molecular structure or site on the surface or interior of a cell that binds with substances such as hormones, antigens, drugs, or neurotransmitters176
9928771368repressora DNA- or RNA-binding protein that inhibits the expression of one or more genes by binding to the operator177
9928771369signal transductionA set of chemical reactions in a cell that occurs when a molecule, such as a hormone, attaches to a receptor on the cell membrane178
9928771370transcription factoris a protein that controls the rate of transcription of genetic information from DNA to messenger RNA, by binding to a specific DNA sequence179
9928771371virusan infective agent that typically consists of a nucleic acid molecule in a protein coat and is able to live only within the living cells of a host180
9928771372function of enzymescatalysts for biochemical reactions. They speed up reactions by providing an alternative reaction pathway of lower activation energy.181
9928771373Lyellidea that shaping of earth took place over long period of time (earth must be very old)182
9928771374Lamarckcharacteristics acquired during organisms lifetime is passed down to offspring (ex: giraffe necks) and body parts that are used grow strong those that don't deteriorate183
9928771375homologous structuresanatomical signs of evolution (ex: arms in bats, whales, humans)184
9928771376vestigial organsorgans that have no importance to body (ex: pelvic bone in snake, whale)185
9928771377convergent evolutionexplains why distantly related species resemble one another. evolved from similar environments but not similar ancestors (ex: dolphins and fish)186
9928771378endemic speciesfound at certain geographic locations and nowhere else187
9928771379gene poolall of the alleles at all loci in all members of a population188
99287713805 conditions for H-W Equilibrium1. no mutations 2. random mating 3. no natural selection 4. population must be large 5. no gene flow (emigration, immigration...)189
9928771381founder effect (genetic drift)a few individuals become isolated from a larger population and establish new one190
9928771382bottleneck effect (genetic drift)sudden change in environment (natural disaster) that reduces pop.191
9928771383directional selectionextreme phenotype favored over others192
9928771384disruptive selection2 extreme values favored over middle193
9928771385stabilizing selectionfavors intermediate values194
9928771386speciationprocess by which new species arise195
9928771387microevolutionchange in genetic makeup of a pop from gen. to gen.196
9928771388macroevoltuonbroad pattern of evolutionary change above species levels197
9928771389biological species conceptdefines a species as a group of populations whose members have the potential to produce offspring, but cannot produce offspring with other species198
9928771390Habitat isolation (prezygotic)two species live in same area but not same habitat (ex: one wrong lives in tree, one on ground)199
9928771391Behavioral Isolation (prezygotic)signals to attract mates that are unique to their species200
9928771392Temporal Isolation (prezygotic)species breed at different times of day/seasons/years (ex: flowers in spring only vs. fall only)201
9928771393Mechanical Isolation (prezygotic)species are anatomically incompatible (ex: ant and horse)202
9928771394Gamete Isolation (prezygotic)gametes are unable to fuse to form a zygote (ex: dog and bunny)203
9928771395Reduces hybrid viability (postzygotic)when zygote is formed, genetic incompatibility causes development to cease204
9928771396reduced hybrid fertility (postzygotic)even if offspring is produced, reproduction isolation still occurs if offspring is sterile205
9928771397hybrid breakdown (postzygotic)two species mate and have viable offsprings but offspring is weak/sterile206
9928771398allopatric speciationa population is separated and two different species are formed207
9928771399sympatric speciationsmall part of pop. forms new species without being geographically isolated (ex: polyploidy plant)208
9928771400adaptive radiationoccurs when many new species arise from one common ancestor209
9928771401gradualismspecies descended from common ancestor and gradually change210
9928771402punctuated equilibruimperiods of stasis punctuated by sudden change211
9928771403oligotrophic lakesdeep lakes, nutrient poor and oxygen rich- contain sparse phytoplankton212
9928771404eutrophic lakesshallow, high nutrition content and low oxygen content - lots of phytoplankton213
9928771405biotic factorsbehaviors and interactions of species214
9928771406abiotic factorsenvironment, climate, non-living factors215
9928771407k-selection-late reproduction -few offspring -invest in raising offspring -logistic growth216
9928771408r-selection-early reproduction -many offspring -little parental care -expontential growth217
9928771409Competition (-/-)when resources are short in supply218
9928771410Predation (+/-)one species is predator and one is prey219
9928771411cryptic colorationanimal is camoflaged by its coloring220
9928771412aposematic (warning coloration)poisonous animal is brightly colored to warn other animals221
9928771413batesian mimicryharmless species mimics harmful species222
9928771414mullerian mimicrytwo bad-tasting species mimic each other so predators avoid them both equally223
9928771415Symbiosiswhen individuals of two or more species live in direct contact with one another224
9928771416Parasitism (+/-)parasite derives nutrients from host225
9928771417Mutualism (+/+)benefits both species (ex: bees and flowers0226
9928771418Commensalism (+/0)benefits one species and neither helps nor hurts another (ex: fern growing in shade of another plant)227
9928771419biomass(sum weight of all members of a pop.)228
9928771420primary productionamount of light energy converted to chemical energy by autotrophs229
9928771421gross primary productiontotal primary production in ecosystem230
9928771422net primary productiongpp - respiration231
9928771423eutrophica lake that is nutrient rich and supports a vast amount of algae232
9928771424nitrificationammonium (NH4+) is oxidized to nitrite and then nitrate by bacteria233
9928771425dentrificationreleases nitrogen to atmosphere by bacteria234
9928771426bioremediationuse of organisms to detoxify polluted ecosystem235
9928771427osmosismovement of water from high concentration to low concentration through selectively permeable membrane236

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