AP Notes, Outlines, Study Guides, Vocabulary, Practice Exams and more!

AP Bio Biochem Flashcards

Terms : Hide Images
12122318973hydrogen bondinginteraction between molecules with O, H, N, F, or Cl0
12122330012polarelectrons shared unequally (ex water, forms hydrogen bonds with other polar molecules)1
12122343813solid waterice, moderate density2
12122347641liquid waterhighest density3
12122350370gas watersteam, lowest density4
12122360609benefits of polaritycan dissolve polar molecules, immiscible with membranes and other nonpolar structures5
12122370973benefits of hydrogen bondshigh boiling point and heat capacity, low density of ice, adhesion and cohesion, surface tension6
12122380596dissociation of waterH₂O ⇌ H⁺ ₊ OH⁻ or 2H₂O →H₃O⁺ ₊ OH⁻7
12122410684pH-log[H⁺], <7 = acidic, >7 = basic8
12122420312pOH= -log[OH⁻]9
12122430208carbonmakes four covalent bonds in chains, which can be bent, straight, or branched; forms macromolecules10
12122437563dehydration synthesisremoving water to link a monomer to a polymer chain, occurs between: - OH and OH in carbohydrates - NH₂ and COOH in proteins - COOH and OH in lipids11
12122481091carbohydrates (visual)12
12122493882carbohydrate monomermonosaccharide13
12122496032carbohydrate polymerpolysaccharide14
12122500298carbohydrate basic formulaCH2O15
12122504698carbohydrate bondglycosidic linkage (covalent bonds)16
12122512533carbohydrate functions- starch: storage in plants (digestable) - cellulose: storage in plants (indigestable) - glycogen: storage in humans (liver)17
12122533831fatty acid (visual)18
12122539437triglyceride (visual)19
12122543690steroid (visual)20
12122550738phospholipid (visual)21
12122556828lipid monomerfatty acid22
12122560874lipid bondester linkage23
12122564145fatglycerol and three fatty acids24
12122572536phospholipids- phosphate group and two fatty acids - aggregate spontaneously in water - form micelles and bilayers with nonpolar, hydrophobic tails inside and polar, hydrophilic heads outside25
12122599885steroidlipid with four fused rings26
12122603966cholesteroltype of steroid, helps membranes stay fluid27
12122611127lipid functionsstore energy, make up cell membranes, hormones28
12122617756saturated fatsaturated with hydrogens, all single bonds, compressible29
12122624114unsaturated fatdouble bonds, not compressible30
12122633117nucleic acid (visual)31
12122640829nucleic acid monomernucleotide32
12122640830nucleic acid polymerpolynucleotide33
12122646169nucleic acid bondphosphodiester linkage34
12122649590nucleic acid structuresugar phosphate backbone and nitrogenous base35
12122670453nucleic acid types- ribose - deoxiribose - no O on 2nd carbon (carbons counted from attachment point of nitrogenous base)36
12122682339nucleic acid functionsDNA directs RNA synthesis, stores hereditary info RNA directs protein synthesis, codes for cell activities37
12122707710protein (visual)38
12122715310protein monomeramino acid (peptide)39
12122718587protein polymerpolypeptide40
12122718588protein bondpeptide bond41
12122721136R group in proteinsdiffers for each amono acid42
12122728140protein functionaccelerate chemical reactions, provide structure and support, transport substances, coordinate organism activity (hormones), movement, cell response to stimuli, protect against disease, enzymes *shape determines function*43
12122755449protein structuredetermined by amino acid sequence and the way in which it folds due to the environment it's in44
12122762103protein primary structurechain of amino acids with a unique order45
12122769384protein secondary structurealpha helix and beta pleated sheets (folds in peptide chain) held together by hydrogen bonds46
12122810759protein tertiary structure3D folding, overall sructure held together by disulfide bridges, ionic bonds, hydrogen bonds, Van der Walls forces47
12122833568protein quaternary structureassembly of tertiary subunits (not in all proteins)48
12122848339protein denaturationwhen a protein loses its 3D shape due to pH, temp, salinity, etc (environmental factors) - sometimes reversible, sometimes not49
12122872369cell membranecreates food vacuoles, allows intercellular communication, contains identity proteins and Na+/K+ pumps, recycles/reuses cell membrane components50
12122886852cell wallprevents cell from bursting in hypotonic environments (not in animals)51
12122933102centriole/centrosomeproduce spindle fibers during cell division (animals only)52
12122936577chloroplastslight and dark reactions of photosynthesis, near cell membrane (plants only)53
12122950842rough ERrecycles/reuses cell membrane components, holds ribosomes, modifies proteins54
12122965161smooth ERmanufactures lipids, recycles membrane components55
12122971237flagellacellular motility (not in plants)56
12122976379golgi apparatusmodifies and packages proteins into vesicles, peroxisomes, and lysosomes; near ER and membrane for fast transport, reuses cell membrane components57
12123007844lysosomecontains digestive enzymes, merges with food vacuole (not in plants)58
12123020011mitochondriaaerobic respiration59
12123027067nuclear envelopecontains DNA and allows exit of mRNA60
12123096433nuclear poreallows exit of mRNA61
12123100204nucleolusmakes ribosomal subunits from proteins, ribosomal mRNA62
12123123656peroxisomecontains enzymes that detoxify metabolic waste63
12123139210plasmodesmataallows intercellular communication (plants only)64
12123148810ribosomemakes proteins from amino acids65
12123161928central vacuoleholds water, materials, and wastes; maintains pressure to provide structure and support (plants only)66
12123182479food vacuolemembrane-enclosed food particles in cell67
12123188935vesicletransports proteins from ER to golgi68
12123192717SA:V ratiosmaller things have greater SA:V ratio => helpful for interacting with outside world, facilitating cell diffusion, getting nutrients in and wastes out - volume determines energy needs69
12123221450semi-permeablesome things can get through, others can't70
12123225179fluid mosaicmembrane = constantly moving structure with proteins embedded in it, polar and non-polar pieces71
12123241254membrane and membrane protein functionscontainment, transport, identity, attachment, signal receiving, chemical reaction sites, attachment to cytoskeleton72
12123254580membrane fluiditylipids held together by hydrophobic interactions, move laterally (fluidity increases as temperature decreases)73
12123267146phospholipid bilayercontainment, transport74
12123271495glycoproteinsidentity, allow for cell-cell recognition75
12123277181receptor proteinsreceive chemical signals from hormones etc76
12123326244channel proteinsallow certain molecules to pass through membrane77
12123345222integral proteinspass through membrane78
12123349139peripheral proteinsloosely bound to the surface of the membrane: attachment points, relay signals, etc79
12123358153embedded proteinspass partway through membrane80
12123385055composition of membranesall membranes have the same composition, differ only by proportion and types of embedded proteins81
12123397563transport through semi-permeable membranepassive - some molecules pass through, others excluded based on size, charge, etc. in general: - small, hydrophobic molecules (O2, CO2, steroid hormones) pass through quickly - small hydrophilic molecules (water, glucose), ions pass through slowly82
12123431154transport proteins(passive/active) - selective channels through membrane, facilitate diffusion - passive: down concentration gradient; ATP required only to make protein, not for transport - active: against concentration gradient, uses ATP83
12123458623ion channel proteinsallow ions to pass through membrane84
12123470925gated ion channel proteinscan be opened/closed by certain stimuli85
12123474698passive transportspontaneous, no ATP required, down concentration gradient86
12123479125diffusionmolecules spread out into available space due to thermal energy, movement continues until molecules are as evenly distributed as possible - each substance diffuses down its own concentration gradient, unaffected by concentration gradients of other molecules in the system87
12123511259osmosisdiffusion of water down its concentration gradient across a semi-permeable membrane - high [water] -> low [water] -low[solute] -> high [solute]88
12123542697osmoregulationmaintaining balance in different water environments, such as by pumping water in or out of a cell89
12123560579facilitated diffusionpassive transport requiring the use of a channel, often used for polar molecules and ions - proteins specific to substance90
12123576300isotonic solutionequal concentration inside and outside the cell, net movement of water is 0, cell stays the same size91
12123585336hypertonic solutionmore particles in solution than in cell, water moves out of cell to dilute surroundings, cell shrinks92
12123594116hypotonic solutionfewer particles in solution than in cell, water moves into cell to dilute internal environment, cell expands93
12123626814water potentialtendency of water to move out of a solution (water moves from high to low water potential)94
12123669274water potential equationΨ = Ψs + Ψp, Ψ=-iCRT i = ionization constant = number of pieces C = concentration (M) R = pressure constant (0.0831 Lbar/molK) T = temperature (K, 273+C)95
12123731876Ψs, solute potentialtendency of water to move out of solution due to [solute]; as M goes up, Ψs goes down - Ψs of water is 0, all others negative96
12123748983Ψp, pressure potential0 in open container; as Ψp goes up, Ψw goes up97
12123758396proportionalityconstant ration between two things98
12123771306active transportmovement against concentration gradient, requires ATP and channel protein99
12123777661sodium-potassium pumpmoves 3NA+ out and 2NA+ in when phosphorelated wit use of ATP, which changes protein shape and allows NA+ to bind - sets up electrochemical gradient100
12123803483proton pumpmoves H+ out of the cell, maintains electrochemical gradient with charge across membrane101
12123813241cotransporttransport of several molecules indirectly drive by transport of one - ATP used to pump a molecule to one side of membrane, have it do work as it diffuses back, brings another molecule with it - energy spent only on transporting initial molecule102
12123855281secretory vesiclesexcrete things from cell103
12123859479exocytosisremoval of materials from cell: vesicles move from golgi/ER, fuse with cell membrane, dump out contents104
12123869818endocytosisintake of large quantities: membrane pinches into a pocket, seals into a vesicle105
12123880999phagocytosisintake of large particles in a food vesicle, not specific106
12123887048pinocytosisintake of nutrient/iron rich liquid, not specific107
12123894560receptor-mediated endocytosisreceptor cells on membrane bind to ligands, pulled into cell (highly secific) - occurs at coated pits108
12123911825coated pitsareas of membrane with coat proteins on the inside and receptors for specific substances on the outside109
12123920230digestionoccurs when vesicle from phago/endocytosis murges with lysosome110
12123931496recycling membrane- proteins recycled back to membrane source - when vesicle pinches off, membrane inside becomes vesicle outside, returns to inside when it fuses with membrane (retains "sidedness")111
12123948091amino functional groupNH2, basic112
12123956236phosphate functional groupH2PO4-, acidic113
12123975975carboxyl functional groupCOOH, acidic114

Need Help?

We hope your visit has been a productive one. If you're having any problems, or would like to give some feedback, we'd love to hear from you.

For general help, questions, and suggestions, try our dedicated support forums.

If you need to contact the Course-Notes.Org web experience team, please use our contact form.

Need Notes?

While we strive to provide the most comprehensive notes for as many high school textbooks as possible, there are certainly going to be some that we miss. Drop us a note and let us know which textbooks you need. Be sure to include which edition of the textbook you are using! If we see enough demand, we'll do whatever we can to get those notes up on the site for you!