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Puritans Flashcards

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4805605933blasphemousdeeply disrespectful of or sacrilegious against God or sacred things; profane0
4805608148habeus corpuslegal document used to review the legality of the party's arrest, imprisonment, or detention1
4805609956inscrutableimpossible to understand or interpret2
4805611874magistratea civil officer or lay judge who administers the law3
4805613806manifestclear or obvious to the eye or mind4
4805616006non-conformityfailure or refusal to follow a standard rule or practice5
4805617426persecutionhostility and ill-treatment, especially because of race or political or religious beliefs6
4805619211repressionthe action of subduing someone or something by force7
4805620287seditiousinciting or causing people to rebel against the authority of a state or monarch8
4805623230theologythe study of the nature of God and religious belief9
4805624455tolerantshowing willingness to allow the existence of opinions or behavior that one does not necessarily agree with10
4805625885solacecomfort or consolation in a time of distress or sadness11
4805628262profane(of a person or their behavior) not respectful of orthodox religious practice12
4805629522haughtyarrogantly superior and disdainful; really snobby13
4805630931relentbecome less severe or intense14
4805631960posterityall future generations of people; the descendants of a person15
4805633089covenantan agreement, especially by binding contract16
4805635497commissionan instruction, command, or duty given to a person or group of people17
4805636982conformitycompliance with standards, rules, or laws18
4805638411perjurewillfully tell an untruth when giving evidence to a court; lie under oath19
4805639455superfluousunnecessary, especially through being more than enough20

Puritans Flashcards

The Puritans first came to America in 1620 on the Mayflower. The Pilgrims, as they were called, were separating from the Anglican church and escaping religious persecution in England by escaping to America. Other Puritans soon flocked to America hoping to "purify" the Anglican Church and develop a colony which would be a model to the world ("a city upon a hill")

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7055022169CalvinismThe teachings and doctrine of John Calvin, a leader in the Protestant Reformation. Believed that no actions taken during a person life would effect their salvation. The Puritan colonies were based on Calvinist doctrine.0
7055022170Church of EnglandThe established church in England that is also known as the Anglican church. The Church of England was founded in 1534 by Henry VIII after a dispute with the Roman Catholic church over the annulment of his marriage which culminated in the Act of Supremacy, declaring the King to be the head of the church.1
7055022171Mayflower CompactAgreement made by the Pilgrims in 1620 when they landed at Plymouth. The compact created the Plymouth colony and made a civil government under James I based on the will of the colonists. The Compact was important in the early organization and success of the colony.2
7055022172William BradfordThe second governor of the Plymouth colony in Massachusetts, he was elected over John Carver in 1621 and was reelected thirty times. He was important in the organization and success of the colony and kept a history of the development of the Plymouth colony that was published in 1856.3
7055022173PilgrimsThe original group of puritan separatists that fled religious persecution in England and found refuge in what is now Massachusetts. The Pilgrims sailed across the Atlantic and reached America in 1620 where they founded the Plymouth colony and organized a government based on the Mayflower compact.4
7055022174PuritansReform movement in the Anglican church in the 16th and 17th centuries and came to America in 1629. The movement aimed at purifying the church of corruption split into separatists, who wanted to end ties with the established church and non-separatists. Seeking religious freedom was a strong motivation for colonies in America.5
7055022175Pilgrims vs. PuritansPilgrims and Puritans were extremely similar in most practices and beliefs, but Pilgrims were a distinct group of Puritans who were not only against the Anglican church but called for total separation from the church, a dangerous belief in religiously tense England.6
7055022177Massachusetts Bay ColonyColony created by the Massachusetts Bay Company. Under the leadership of John Winthrop, the colony was created to provide the world with a model Christian society. The colony was created in 1630 and it was governed through a General Court selected by church members.7
7055022178City Upon a HillName given to the Puritan society that was to be created in the New World. The leader of the Puritan migration, John Winthrop planned to create a utopian society based on Puritanism that would have no class distinction and would stress the importance of community and church.8
7055022181John WinthropThe first governor and one of the founders of the Massachusetts Bay Colony and a member of the Massachusetts Bay Company. He played a key role in the puritan migration and intended to create a utopian society in America. He was elected governor twelve times and pursued a conservative religious and governmental policy.9
7055022182saintsHigh standing members of the church who gained recognition and were put on a council that governed the congregation. Under Puritan doctrine, to become a saint the person had to be a member of the congregation and have been chosen by the church council.10
7055022183New England WayThe Puritan dominance of New England and their desire to create a utopian society based on their doctrine created a distinct society in New England. Unlike other colonies, Puritans were guided by their religion and created a government and society tied to the church.11
7055022184Covenant TheologyChristian Theology that stressed that a agreement was made by God with humans with the death of Jesus for the salvation of mankind. The theology differs from sect to sect, some assert that salvation is granted to all, some that its is earned and others that it can be achieved by faith alone.12
7055022185conversion relationPart of the Massachusetts Puritans practice, it was a requirement of new members. The Relation required that any member of the congregation must go through an examination before the congregation. Because of its unpleasantness, later generations did not go accept it and the half-way covenant was adopted.13
7055022186CongregationalismProtestant organizational system based on the freedom of each church to control its affairs. An offshoot of the separatist, it was continued by the pilgrims in America where it was adopted by the new churches as a way to maintain local independence. Congregationalism was part of the strong independence of the colonies.14
7055022187Cambridge PlatformAgreement and plan formed by Puritans before they landed in 1629. The platform was the source for the Puritans of the government and organization for their colony, and it established a government under the authority of the King of England.15
7055022188Contrast Puritan Colonies with othersBecause most colonies were created with financial or political gains in mind, puritan colonies had a special distinction from them. The puritans came to American seeking religious freedom and had a strong work ethic enabling them to achieve a success not seen in other colonies.16
7055022189dissentersPeople objected to the accepted doctrine of the established church. The puritans who migrated to America were dissenters from the Church of England who created a new church in the colonies. Religious outcasts from the puritan church such as Ann Hutchinson and Roger Williams were also dissenters.17
7055022190Anne Hutchinson, antinomianismEarly New England religious leader who founded the doctrine of antinomianism, the belief that the Gospel frees Christians from required obedience to laws. She was banished to Rhode Island in 1637 for her belief in antinomianism and her insistence on salvation by faith and not works.18
7055022191Roger Williams, Rhode IslandEarly colonial clergyman who founded the religiously tolerant colony of Rhode Island in 1636. Williams was banished from Massachusetts for his belief in religious freedom, he established a colony at Providence in 1636 that tolerated all dissenters and was in good relations with the Natives.19
7055022192Massachusetts School LawLaw also Known as the Old Deluder Act of 1647, that replaced home education by creating a system in which small towns would have a person capable of teaching the children and every town of over one hundred homes would have a school. The law was a step towards creating a universal education system.20
7055022193town meetingsThe center of Colonial America political life especially in New England. Town Meetings were gatherings where all the voters in the town or nearby countryside would all congregate and go over issues that most interested them, such as town officers, and taxes for the following season.21
7055022194Voting Granted to Church MembersThe New England puritans developed a more democratic system of government than in England that gave the power to elect the governor to all male saints. The idea was furthered in 1644 when it adopted a bicameral court with elected delegates.22
7055022196Brattle Street ChurchChurch located in Boston, Mass. Completed in 1699. Thomas Brattle, a wealthy merchant and official of Harvard College organized the church against the will of Cotton Mather because of its closeness to the Church of England. The Church was strongly opposed to the Salem Witchcraft trials in 1692.23
7055022197Salem Witch TrialsThe fear of witchcraft that came to a head in the 1691-1963, especially boiling over in Salem, Massachusetts in 1692. This fear ended with the death of many innocent women. Most of the women were middle aged wives or widows. Many implicated others for fear of their lives. The Salem Witch Trials pinpointed the underlying tension that was coming to head in many colonies due to religion and social standings.24
7055022198Puritan EthicTerm that characterizes the strong sense of purpose and discipline that Puritans had. Part of the work ethic also resulted from a belief that wealth and success were a sign of saintliness and that idleness was a sin. This work ethic also helped the Puritans find success in the colonies and translated to an American colonial work ethic.25

Biochemistry Flashcards

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5943450252Endergonic-Absorbs energy from surrounding environment -Not spontaneous0
5943455761Exergonic-Energy is released -Spontaneous1
5943474688Anabolic-Energy is put in to make simple substances combined into complex structures2
5943480480Catabolic-Energy is released when the breakdown of complex material turns into simple substances3
5943487109Spontaneous Chemical Reaction-Potential energy of the reactants is greater than that of the products4
59435068414 Major Biological MacromoleculesCarbohydrates, Lipids, Proteins, Nucleic Acids5
5943525037Carbohydrates-Provides energy for the body -3 subtypes: monosaccharide, disaccharide, polysaccharide6
5943538930Lipids-Hydrophobic, nonpolar, store energy, provide insulation, make up cell membranes, building block for hormones -Examples: fats, oils, waxes, phospholipids, steroids7
5943564385Nucleic Acids-Storing genetic material -Nucleotides, DNA, RNA8
5943575268Proteins-Enzymes, Hormones, Amino Acids9
5943606946Dehydration Synthesis-One monomer forms a covalent bond to another monomer, releasing a water molecule in the process. -Generally require energy10
5943617352Hydrolysis-A bond is broken, or lysed, by addition of a water molecule -Generally release energy11
5943860240Peptide bondForms between carboxyl group (COOH) of one amino acid and the amino group (NH2) of the next, with an H2O molecule12
5943873024Glycosidic BondType of covalent bond joins a carbohydrate molecule to another group13
5943878834Ionic BondComplete transfer or electrons14
5943880399Covalent BondSharing of electrons15
5943885383Ester LinkageCompound formed from an alcohol and an acid by removing H2O16
5943894288Amino Acids-Contain: R group, amino group, alpha carbon, and carboxylic acid group -Attached by peptide bonds17
5943937134Starch-Stored form of sugars in plants -Made of two polysaccharides (amylose and amylopectin)18
5943949806Triglycerides-Primarily stored in specialized fat cells (adipocytes)19
5943956188SaturatedThe fatty acid has only single bonds between neighboring carbons in a hydrocarbon chain20
5943961916UnsaturatedThe fatty acid has a hydrocarbon chain h a double bond21
5943969399MonounsaturatedOne double bond in a fatty acid22
5943973648PolyunsaturatedMultiple double bonds in a fatty acid23
5943982963Phospholipids-Major component of plasma membranes -Fatty acids chains attached to backbone of glycerol24
5944017687Chemiosmosis/ATP ProductionProduction of ions across a semipermeable membrane down concentration gradient25

Biochemistry Flashcards

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8397515946CytosinePyrimidine; DNA and RNA0
8397536393UracilPyrimidine; RNA only1
8397549465ThyminePyrimidine; DNA only2
8397559334AdeninePurine; DNA and RNA3
8397570578GuaninePurine DNA and RNA4
8397583595Purinedouble-ring nitrogenous base; Adenine and Guanine5
8397590071PyrimidineSingle ring; Thymine, Uracil, and Cytosine6
84069126743-deoxyfructose-5-phosphate7

Biochemistry Flashcards

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8397648660Covalent Bond2 non-metals, electrons are shared0
8397655748Ionic BondMetal + Nonmetal, 1+ electron is transferred1
8397664590IonWhen 2 atoms are attracted together due to an unequal number of electrons2
8397672314Hydrogen BondsA weak bond between 2 molecules3
8397686182CohesionAttraction between 2 like things4
8397695155AdhesionAttraction between 2 different things5
8397708636Capillary ActionThe tendency of a liquid to rise or fall due to surface tension6
8397717719HydrophilicCan dissolve in water7
8397721524HydrophobicCan not dissolve in water8
8397729128AcidAn acid is a substance which when dissolved in water, releases protons (hydrogen ion)9
8397740690DissociationAmount of H-ions released compared to the total amount of a compound, this is a measure of the strength of the acid10
8397754982pHThe negative logarithm of the hydrogen ion concentration11
8397764210Important pH EquationspH = -log[H+] pOH = -log[OH-] pH + pOH = 14 [OH-] [H+] + 10^-1412
8397903307BufferA solution of a weak acid and its conjugate base (or vice versa) that resists changes in pH13
8397972608Buffering CapacityThe maximum concentration of Hydrogen ions that a buffered solution can neutralize14
8397979132TitrationMethod for determining the concentration of a solute in a solution15
8397987577CarbohydrateA type of biological molecule that occurs naturally in organisms16
8398005590What atoms form a carbohydrate?Carbon, Hydrogen, and Oxygen17
8398018476MonosaccharideC6 H12 O618
8398037893Name The Kinds of MonosaccharidesGlucose, Fructose, Galactose19
8398057154PolymerMore than 1 monomers work together20
8398061367Dehydration Synthesis ReactionRemoving water (occurs when 2 carbohydrates bond together)21
8398068095DisaccharideC12 H22 O1122
8398088904PolysaccharideChemical formulas vary23
8398098757ProteinOrganic molecules consisting of chains of amino acids bonded together24
8398106599Amino acidsBuilding blocks of proteins (20 common amino acids)25
8400830250Primary Protein26
8400835927Secondary Protein(Refer to image)27
8400840257Tertiary Protein(Refer to image)28
8400846911Quaternary Protein(Refer to image)29
8401654120Roles of proteins1. Enzymes 2. Cellular Defense 3. Cellular Transport 4. Inter/intra cellular structure 5. Motion (Actin) 6. Regulation30
8401670657LipidFats and Oils31
8401759403EnzymeBiological Catalysts (chemicals that affect the rate of a chemical reaction)32
8401767158SubstrateMolecules upon which an enzyme act33
8401777030Active SitePart of the enzyme that fit with the substrate34
8401782372End with the letters "ase"enzymes35
8401787884Enzymes are ______________.proteins36
8401793462Activation energyThe minimum amount of energy that must be present at the start of a reaction (Enzymes lower the activation energy)37
8401818160DenaturedChange in shape38
8401826484When we break down a log of sugar in a short period of time, ___________ is created.heat39

Biochemistry Flashcards

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5910106831Organic CompoundsContains carbon (C) bonded with other elements, especially C, O, H, N Biologically "living" things0
5910107022Inorganic CompoundsEverything else, ex. H2O, O21
5910109251WaterInorganic, Chemical structure dictates properties and biological functions Properties of _____: Polar molecule; -overall neutral but slight charge end to end -dissolves other molecules, therefore an effective solvent2
5910114326AdhesionAttractive force between unlike substances -Results in Capillarity: water moves through/up narrow tube or pores against gravity3
5910114445CohesionAttractive forces between like substances -Causes H2O to change its temperature very slowly4
5910119169CarbonHas 4 outer shell electrons (e-): wants 8 electrons Shares its 4 electrons (e-) with 4 more e-of adjacent atoms (often C, O, H, and/or P/N) As each carbon atom creates 4 covelant bonds around itself a variety of sizes and shapes of molecules result: -chains -rings -networks (or branches)5
5910119170Monomerbasic molecule, a building block, containing C, O, H (1 brick)6
5910121303Polymercreated from 2 or more monomer that link together7
5910123650Macromoleculevery large polymer (1000's monomer)8
5910129355Condensation (Dehydration) Reactionreaction linking monomers together to form polymer (to build larger molecules)9
5910134429Hydrolysisreaction breaking bonds in polymer to form monomers (breaking down large molecules)10
5910134430Organic Compound Groups4 major groups: Carbohydrates, Lipids, Proteins, Nucleic Acids11
5910140142CarbohydratesConsists or C : H : O in a 1 : 2 : 1 ratio Importance: QUICK energy (starch), structural support in plants, product of photosynthesis12
5910142109MonosaccharideMonomer of the Carbohydrate (simple sugars - ex: glucose, fructose, galactose) Chemical formula: C6H12O6 ring13
5910143598Disaccharide2 monosaccharides14
5910147118Polysaccharide3+ monomers of carbohydrates Starch found in plants, Glycogen found in animals, Cellulose found in plant cell walls15
5910542431IsomerDifferent physical arrangements of the same numbers and types of atoms16
5910149662Lipids (fats)Consists of lots of C and H, a little O Do not dissolve in water (Hydrophobic) Importance: Plants; cuticle, waxy coating on plant leaves prevents dehydration, Earwax; in animals serves as waterproof, insect repellent, Lipids store lots of energy in many C-H bonds, Forms cell membranes17
5910161388Fatty AcidMonomer of Lipids in the form of a chain18
5910189155TriglycerideFat polymer, 3 fatty acids and a glycerol At room temperature, fats generally are liquid in plants, solid in animals19
5910198634ProteinsConsist of C, H, O, N Importance: -found in skin and muscles of animals -found in milk, soy products, meat, nuts, eggs -creates enzymes which run chemical reactions inside of cells, help to run metabolism, act as intermediary catalysts in metabolism -speed up, reactions help chemical reactions to occur but they don't get used up in the reaction20
5910201371Amino AcidsMonomer of the protein, 20 different are possible each had a similar basic structure21
5910201372Dipeptide2 amino acids bonded together22
5910204685Polypeptide3+ amino acid bonded together23
5910206481Peptide BondCovelant bond between individual amino acids in a polypeptide24
5910211994Nucleic AcidsConsists of C, O, N, H, P Importance: 1 gene is the code (instructions) for 1 protein25
5910211995NucleotideMonomer of Nucleic Acids N-bases >>> pair up | A-T G-C26
5910214831DNADeoxyribonucleic Acid Contains genetic material = chromosomes = many genes each strand of ___ contains many genes27
5910214832RNARibonuleic Acid Messenger between DNA and the rest of the cell Transfers genetic information from the nucleus to the ribosomes in the cytoplasm to build proteins28

Biochemistry Flashcards

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8230356910Neutrons charge is...none0
8230360323Protons charge is...positive1
8230379152Electrons charge is...negative2
8230381929element-a pure substance that cannot be broken down into simpler substances by physical or chemical means -own set of unique properties3
8230429970compoundsa pure substance composed of 2 or more elements that are chemically bonded4
8230437606chemical bondsenergy is required to put together compounds and energy is released when bonds are broken5
8230448209ATP-made by cells for fuel -when we brake the bond in between the phosphates we get our energy6
8230484567organic compounds-must contain both carbon and hydrogen - Ex) glucose (C6H12O6)7
8230500795inorganic compound-everything else -produced by non-living natural processes in a laboratory -these compounds are needed in plants and animals in order to perform all important reactions such as photosynthesis, respiration, and digestion -Ex) carbon dioxide (CO2) water (H2O) salt (NaCI) oxygen (O2)8
8230588475polarity of wateruneven distribution or charges9
8230594910cohesionwater sticks to water10
8230598967adhesionwater sticks to other things11
8230608304surface tensionan effect within the surface layer of a liquid that cause that layer to behave as an elastic sheet12
8230623189capillary actiontendency of water to rise in a thin tube13
8230632932pH scale-measures the amount or concentration of hydrogen ions in a solution -hydrogen ions = H+ -hydroxide or hydroxyl group = OH14
82306822454 types or organic compounds are-carbohydrates -lipids -nucleic acids -protiens15
8230704644carbohydrates-sugars that provide organisms with immediate energy -glucose is used in cells to make ATP during cellular respiration16
8230728447what is another term for sugarsaccharide17
8230733135monosaccharide-one sugar molecule ( simple sugar) -the building blocks, or subunits of all carbs -ring structure18
8230759441disaccharide2 sugars combined19
8230764145polysaccharide-sometimes called starches -many sugars combined20
8230778711hydrolysisto add water and break something apart21
8230789071nucleic acids-makes up DNA -subunit or building block of nucleotides22
8230802932the 4 nitrogen bases found in nucleotides are-adenine -thymine -guanine -cytosine23
8230850805nucleotide structurephosphate, deoxyribose sugar, and base24
8230863271lipids-source of stored energy -makes up a part of the cell membrane -lipids = fats and oils -oils, nuts, butter25
8230890073fatty acidsbuilding blocks of lipids26
8230895760lipids make up thecell membrane27
8230910157proteinsmake up most every structure of every organism, hair ,muscles , enzymes28
8230934072amino acidsproteins building blocks or subunits29
8230920041enzymesin your saliva, stomach, and small intestine are protiens that help you digest your food30
8230945280food sources of protiensmeat, lentils, tofu, beans31
8230951259amino acid structure1. amino group 2. carboxyl group 3.hydrogen group 4. functional or variable group (R group)32
8230973438monopeptideOne single amino acid33
8230992813dipeptidetwo amino acid34
8230995799polypeptidemany amino acids35
8231022121what is a carbohydrates functionimmediate energy36
8231039165carbs picture37
8231043642lipids functionstored energy and cell membrane38
8231050265lipids building blockfatty acid39
8231053383lipids picture40
8231058718nucleic acids funtionDNA and genetic material41
8231062758nucleic acids building blocknucleotide42
8231067950nucleotides picture43
8231072099proteins functionhair , nails , muscles, enzymes, etc44
8231079980proteins building blockamino acids45
8231033748whats a carbs building blockmonosaccharide46
8231082468EnzymesProteins that speed up the rate of chemical reactions inside the cell that are sometimes called biological catalysts47
8237958084activation energyEnergy needed to get a chemical reaction started48
8237958085synthesisEnzymes that put things together49
8237958086DigestionEnzymes break things apart50
8237958087What are enzymes made up ofAmino acids51
8238001260How many types of amino acids are there2052
8238001261What does the order of amino acids determineThe function or job of an enzyme53
8238001262HomeostasisInternal balance54
8238001263Most enzymes end inase55
8238001264Maltese breaks downMaltose56
8238001265Protease breaks downProteins57
8238001266Lipase breaks downLipids58
8238001267Individual enzymes areHighly specific59
8244708896lock and key model60
824472395561

Biochemistry Flashcards

Terms : Hide Images
7801373420CohesionAn attraction between molecules of the same substance.0
7801373421AdhesionAn attraction between molecules of different substances.1
7801373422HydrophobicDoesn't mix with water2
7801376199HydrophilicWill mix with water3
7801376200CarbohydrateSugar and starch4
7801376201LipidFat and oil5
7801379520ProteinMade of chains of amino acids6
7801381615Nucleic AcidDNA7
7801381616AtomSmallest particle of matter8
7801381617MoleculeTwo or more atoms held together by covalent bonds9
7801383774Covalent BondA strong chemical bond that involves sharing a pair of electrons between atoms in a molecule.10
7801383775Hydrogen BondA weak attraction between a hydrogen atom and another stronger atom like oxygen or nitrogen.11
7801385687CarbonElement who's atomic symbol is C12
7801385688HydrogenElement who's atomic symbol is H13
7801387868OxygenElement who's atomic symbol is O14
7801387869SulfurElement who's atomic symbol is S15
7801387870PhosphorousElement who's atomic symbol is P16
7801398259NitrogenElement who's atomic symbol is N17

Biochemistry Flashcards

Terms : Hide Images
8335411448UniverseThe system and its surroundings together.0
8335411449SystemAll the reactants and products, solvent, and immediate atmosphere >> everything within a defined region of space.1
8335411450Isolated systemIf the system exchanges neither matter not energy with its surroundings.2
8335411451Closed systemIf the system exchanges energy but not matter with its surroundings.3
8335411452Open systemIf system exchanges both energy and matter with its surroundings.4
8335411453Two ways in which living organisms derive energy from their surroundings?1. They take up chemical fuels(glucose) from the environment and extract energy by oxidizing them. 2. They absorb energy from sunlight.5
8335411454First law of thermodynamicsIn any physical or chemical change, the total amount of energy in the universe remains constant, although the form of the energy may change.6
8335411455Photosynthetic cellsAbsorb light energy and use it it to drive electrons from water to carbon dioxide, forming energy-rich products such as glucose, starch, and sucrose. And releasing O2 into the atmosphere.7
8335411456Nonphotosynthetic cells/organismsObtain energy by oxidizing the energy-rich products of photosynthesis and then passing electrons to atmospheric O2 to form water, carbon dioxide, and other end products.8
8335411459Potential Energy (energy in cells)•nutrients in environment •sunlight9
8335411460Cellular work•chemical synthesis •mechanical work •osmotic and electrical gradients •light production •genetic information transfer10
8335411461Oxidation-reduction reactionsOne reactant is oxidized(loses electrons) as another is reduced(gains electrons)11
8335411462Entropy(S)The randomness or disorder12
8335411464Negative DeltaGprocess is spontaneous13
8335411465endergonic reactionsrequires energy14
8335411466exergonic reacctionsgive off energy15
8335411467Which of the following statements are true about peptide bonds: 1. peptide bonds are amide linkages. 2. peptide bond formation is a hydrolysis reaction. 3. a tetrapeptide contains five amino acid residues. 4. peptides are polymers of proteins. 5. peptide bonds form from ncleophilic attack by an electron pair on an alpha amino nitrogen atom on an alpha caboxyl carbon atom of another amino acid.1 and 5.16
8335411468which of the following are functions of amino acids: 1.hormones 2.metabolic intermediates 3. neurotransmitters. 4. carriers of gentetic information. 5. protein components.1, 2, 3, 517
8335411469glycineGlycine Gly G Nonpolar18
8335411470glycine (3 letter)gly19
8335411471G (1 letter)G20
8335411472AlanineAlanine Ala A nonpolar21
8335411473Alanine (3 letter)Ala22
8335411474Alanine (1 letter)A23
8335411475ValineValine Val V nonpolar24
8335411476valine(3 letter)Val25
8335411477valine (1 letter)V26
8335411478leucineleucine leu L nonpolar27
8335411479leucine 3leu28
8335411480leucine 1L29
8335411481Isoleucineisoleucine ILE I nonpolar30
8335411482isoleucine 3ILE31
8335411483isoleucine 1I32
8335411484methioninemethionine met m nonpolar33
8335411485methionine 3met34
8335411486methionine 1M35
8335411487phenylalaninephenylalanine phe F aromatic36
8335411488phenylalanine 3PHE37
8335411489phenylalanine 1F38
8335411490tyrosintyrosine tyr y aromatic39
8335411491tyrosin 3tyr40
8335411492tyrosin 1Y41
8335411493tryptophantryptophan trp W aromatic42
8335411494tryptophan 3trp43
8335411495tryptophan 1W44
8335411496serineserine ser S polar uncharged45
8335411497threoninethreonine THR T polar uncharged46
8335411498threonine 3thr47
8335411499threonine 1T48
8335411500asparagineasparagine asn N polar uncharged49
8335411501asparagine 3asn50
8335411502asparagine 1N51
8335411503glutamineglutamine GLN Q polar uncharged52
8335411504glutamine 3GLN53
8335411505glutamine 1Q54
8335411506cysteinecysteine cys C polar uncharged55
8335411507lysinelysine lys K polar charged (+)56
8335411508lysine 3lys57
8335411509lysine 1K58
8335411510argininearginine arg R polar charged (+)59
8335411511histidinehistidine his H polar charged(+) basic60
8335411512histidine 3his61
8335411513histidine 1H62
8335411514glutamic acidglutamic acid glu E polar charged (-) acidic63
8335411515glutamic acid 3GLU64
8335411516glutamic acid 1E65
8335411517Aspartic AcidAspartic Acid ASP D polar charged(-)66
8335411518arpartic acid 3ASP67
8335411519aspartic acid 1D68
8335411528amino pkaabout 969
8335411531which of the following statements about amino acids are true: 1.asn and gln are polar amino acids. 2.lysine has one stereocenter. 3.the ala side chain does not form hydrogen bonds with other amino acids. 4.the form of glycine used by the human body is d-glycine. 5.proline has an overall charge at pH seven. 6.phe can undergo oxidation to form tyr. 7.methionine is a thiol.1,2,3,6.70
8335411532zwitterion form of an amino acid71
8335411533archaeamost inhabit extreme environments72
8335411534bacteriae coli73
8335411535eukarya-cells have a nucleus -cells have membrane-bound organelles -many are multicellular -plants -eukaryotes74
8335411536archaea and bacteria-cells do not have a nucleus -prokaryotes75
8335411537bacteria, eukarya, archaecells contain genetic material76
8335411552ketone77
8335411557carboxyl group78
8335411558carbonyl group79
8335411565aldehyde80
8335411574translationrna >> protein81
8335411575transcriptiondna >> rna82
8335411576reverse transcriptionrna >> dna83
8335411577replicationdna >> dna84
8335411582acidhydrogenated85
8335411583conjugate basedehydrogenated86
8335411585titration curve87
8335411586pka vs pka relationwhatever has the lower Ka value is favored.88
8335411588how does a buffer resist change in pH upon addition of a stong acidthe stong acid reacts with the weak base in the buffer to form a weak acid, which produces few H+ ions in solution and therefore only a little change in pH.89
8335411589what accurately describes the blood buffering system in humansbicarbonate buffer system90
8335411590how does hyperventilation affect pHit decreases CO2 and H+ in the blood, increasing pH.91
8335411591which three of the statements are true: 1. hydrophobic molecules are individually hydrated in water, increasing the entropy of the system. 2. amphipathic(amphiphilic) lipids are the structural basis of biological bilayer membranes. 3. the tendency of water to minimize its contact with nonpolar substances is called the hydrophobic effect. 4. hydrophobic molecules do not readily dissolve in water in part because water molecules involved in hydration cannot participate in normal hydrogen bonding with one another.2, 3, 592
8335411602Hydrogen bonding-90% electrostatic in nature -10% quantum mechanical -easily broken and reformed -stronger when in linear formation93
8335411604amphipathicpolar head and nonpolar tail94
8335411608enzymesbiocatalyst enhance the rate of reaction without being consumed by lowering the activation energy.95
8335411609transition statefirst the distortion of existing bonds, highest point in reaction diagram96
8335411610activation energydifference in reactants and transition state97
8335411611catabolismdegradative, free energy yielding reactions98
8335411612anabolismreactions that require energy99
8335411613metabolismthe overall pathway.100
8335411614deoxyribonucleotidesbasic unit of DNA linear polymer of 4 different monomeric subunits101
8335411615native conformationthe precise 3D structure102
8335411616micellesall hydrophobic groups are sequestered from water. ordered shell of h2O molecules is minimized and entropy is increased. the nonpolar is on the outside.103
8335411618pH optimumenyzmes usually show maximum catalytic activity.104
8336265700phosphate buffer systema reversible reaction that resists pH changes at each pKa that is created by conjugate acid-base equilibrium from the 3 possible hydrogens coming off105
8336306148FRET false negativesspacial difficulties due to folding (greater than 5nm) or they really don't interact106
8336350275affinity chromatography can separate by what factors?charge, polarity107
8336391197hydration shellthe hydrogen bonds that form with ions causing salts to dissolve108
8336415973osmolaritywater to solute ratio must be equal in and outside of cells.109
8336444679pH is less than pKamore acid than base110
8336456926pIcombined pKa, not stable111
8336464658alpha carbonone carbon from carbon double bonded to O112
8336494561protein-protein interactionsincrease entropy, many chemical forces to keep together113
8336509257intracellular bufferphosphate and histadine114
8336525005spontaneousdon't require energy115
8336552854SDS pageseperation based on size116
8336562278UV spectroscopyseperation based on aromoticity117
8336571628IEFseperation based on pI118
8336579948gas chromatographyseperation based on size119
8336596725alpha helix formationH-bonds in backbone120
8336608946subunit associationR-group to Rgroup or backbone121
8336639087serine proteasebreak peptide bonds ex trypsin122
8336702111native contactmust be close but not already connected123
8336729597helix-turn helixDNA binder124
8336716818coiled coil domainDNA binder125
8336729598BAR domainhomodimer126
8336789405center of membrane residueshydrophilic127
8336872786liposomemore specific than a pill, a pill can do everything but be as specific128
8336899529Residues most likely to be phosproylatedS, T, Y129
8336925000Prosthetic groupsions, carbohydrates, cofactors130
8336941216lipid metabolismhigh energy release131
8336947283antiportmoves ions in opposite directions132
8336953936symportmoves ions in same direction133
8336962674triglyceridesnot in plasma membrane134
8336980383membrane rigidityimpacts the amount of protein protein interactions within the membrane135
8337004230shuttle vectors requireboth species origin of rep., restriction sites, selection genes for both species136
8337027793double displacementping-pong, AE1 -> XE2 -> BE2-> YE1137
8337063446single displacementAEB138
8337087309lysozyme and bacteriagram positive have peptidoglycan layer which is recognized and broken down by lysozyme. Gram negative is not.139
8337124467alpha linkageo bond down140
8337134737numbering linkagesame as the carbon numbers that are linked141
8337153427Reducing sugarshave H to give to reduce an oxidant. like in glucose142
8337255339denealingcauses a spike in wavelength at 260nm143
8337302728viability requiresorigin of rep but only 1144
8337318023complementationreverse and match145
8337327523peptide bonds formed byribosomes146
8337348485insertionsdon't cut your genes.147
8337354062sanger sequencingbottom up to 3'148
8337381724pyrosequencingright to left is 5' to 3'149
8337431940km/ kcatefficiency, bigger is better150
8337447761Kmconstant for enzyme151
8337460806kcataffinity152
8337745228vmax changeconfirmation change, enzyme itself is changed153
8337768567K changeaffinity changed154
8337785076competitive inhibitionsame binding site155
8337794082noncompetitive inhibitiondifferent binding site156
8337797246allostericfavors one confirmation over another157
8337813746steady statethe general linear pattern of the M&M graph158
8337847986factor Xclotting by glycosylation of prothrombin to thrombin159
8337929631lower curveFavors T0160
8337945547gluconeogenesisinitiated by glycogen phosphorylase in phosphorylated form161
8337980261CAR-Tintegrated plasmid with V region and C region162
8338030529Fixing mutationsmost specific is Crisper-Cas163
8338044159increase in kMindicates inhibitor164
8338059321increase vMaxcofactor165
8338078065alphaKG-> glutamatePPD aminotransferase166
8338125006glutamate with GSbecomes glutamine (gln)167
8338143388pIIacauses adenylation of GS to turn it off168
8338149445pIIdcauses deadenylation of GS to turn it on169
8338171466carbamoyl-Pinhibits glutamine production, made by carbamoyl-p synthetase170
8338226498nucleic acid degradationproduces a lot of Uric acid171
8338265119goal of amino acid degradationproduce 1 of 7 intermediates for energy production172
8338280291R5P-> PRPPpyrophosphokinase173
8338302773PRPP-> PRamineamidotransferase174
8338319339IMPcommon purine intermediate175
8338331424IMP dehydrogenasepathway to G176
8338335837adenylosuccinate synthetasepathway to A177
8338389155UMPcommon pyrimidine intermediate178
8338397616CPSIIeukaryotic regulation for pyrimidine synthesis179
8338410159ATCaseprokaryotic regulation for pyrimidine synthesis180
8338437303ribonucleotide reductasereduces RNA to DNA181
8338452759How many subunits does RNR have4182
8338456647Domains of RNRA- activation, S- specificity, C-catalytic183
8338467387ATP in S producesdCTP and dTTP184
8338489699dTTP in S producesdGTP185
8338506747dGTP in S producesdADP186
8338523319how to make dTTPdCDP-> dUMP187
8338541301dCDP-> dUMPdCMP deaminase188
8338591834ECenergy charge189
8338594497EC of 1all ATP190
8338598431EC of 0all AMP191
8338607930high ECfavors U reactions192
8338612679U reactionsanabolic, use ATP, like gluconeogenesis193
8338623865R reactionscatabilic, produce ATP like glycolysis194
8338637911brainmost U reactions195
8338644713livermost R reactions196
8338694865processivitytime from enzyme attaches to when it dissociates197
8338710156Pol1medium in all but processivity, has 5'-3' exonuclease, removes primer198
8338730795Pol2small in all, but number, for repair199
8338744710Pol3biggest in all but number, main replicator200
8338756056all PolMg cofactor201
8338957937Why is RNR a target of cancer drugs?If you don't have enough dNTPs you cant replicate202
8338986330MutationsCan cause problems in intron or exon (create alternative splicing)203
8339032282BRACO1 domainsring finger, BRCT, RAD51 (recombinase)204
8339063304excisionreally bad damage is replaced205
8339080463SOSsurvival not correct206
8339086090RecBDCfor restarting replication, 1 break, 3' overhang, can have 2 holiday junctions207
8339133538telomereimportant for protection208
8339139694cancerhas telomerase, uncontrolled growth, p53 is not active209
8339169475eukaryotesmost regulation of expression210
8339180049cappingguanyly-transferase211
8339188035polyA tailPAP212
8339210900splicingintron removed by lariat formed and cut off213
8339223652what removes lariattransesterifaction214
8339238539interferancemany forms, lncRNA can have multiple functions215
8339247842tRNAcoordination between anticodon and amino acid216
8339272288protein synthesisribosome only translates217
8339282633initiation inhibitioneIF2 form a tight complex by phosphorylation218
8339296691regulation of phosphorylationcan be by cofactors or amount of RNA219
8339330465eIF4recognizes cap220
8339334413folding processcan be regulated to ensure proper proteins are formed.221
8339374053snap shotdegradation and metabolism are in a ratio at that moment and you can affect one to see the rate of the other222
8339402893misregulationsthe opposite of what is supposed to happen223
8339413207glycogen phosphorylasestarts gluconeogenesis224
8339447135gluconeogenesis process regulationmakes glucose or pyruvate is increased in diabetes225
8339473542hemoglobin A1Camount of glucose bound to hemoglobin226
8339498720Qn sitereleases UQ, no electron227
8339506258Qpreleases electron to FeS and UQ to Qn228
8339531416protein kinasekeeps glycolysis going229
8339540224when glucose metabolism is messed uplipid metabolism increases230
8339549150TPPmade from vitamin B, important cofactor in metabolism231
8339560090lipid metabolism equationmolecules( (cuts+1*10 +cuts (4))-2)232
8339603831pyruvate oxidation3 enzymes, 5 cofactors, 1 NADH233
8339645876major mineralsCPPSSCM234
8339690380C4 plantsonly have carboxylase in mesophyll cells235
8339739935malate shuttleNADH to NADH or to citrate or OOA or to CO2 and electron236
8339766562liver PFKincreases gluconeogenesis237
8339794044Treat Diabetesinhibit glucagon and gluconeogenesis238
8339832176inhibiting gluconeogenesis causes weakness becauseturns off pyruvate carboxylase239
8339850940too much ATPincreases glycolysis240
8339864384deficiency in an enzymecauses all after it to decrease, all before to increase241
8339898657low G6PDH activitycaused by G6P being used for glycolysis, less glucose uptake, and increases ROS242
8339929372cyto C reductionComplex 3243
8339929373cyto C oxidationcomplex 4244
8339943521cyanidecomplex 3245
8339947840DCCDATP synthase246
8339956867Antimycincomplex 2247
8339983112demoralcomplex1248
8340065189citrate transportinduces gluconeogenesis249

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